KEGG   Oryctolagus cuniculus (rabbit): 100350656
Entry
100350656         CDS       T03373                                 
Symbol
RLA-DRB1
Name
(RefSeq) HLA class II histocompatibility antigen, DRB1 beta chain
  KO
K06752  MHC class II antigen
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04145  Phagosome
ocu04514  Cell adhesion molecules
ocu04612  Antigen processing and presentation
ocu04640  Hematopoietic cell lineage
ocu04658  Th1 and Th2 cell differentiation
ocu04659  Th17 cell differentiation
ocu04672  Intestinal immune network for IgA production
ocu04940  Type I diabetes mellitus
ocu05140  Leishmaniasis
ocu05145  Toxoplasmosis
ocu05150  Staphylococcus aureus infection
ocu05152  Tuberculosis
ocu05164  Influenza A
ocu05166  Human T-cell leukemia virus 1 infection
ocu05168  Herpes simplex virus 1 infection
ocu05169  Epstein-Barr virus infection
ocu05310  Asthma
ocu05320  Autoimmune thyroid disease
ocu05321  Inflammatory bowel disease
ocu05322  Systemic lupus erythematosus
ocu05323  Rheumatoid arthritis
ocu05330  Allograft rejection
ocu05332  Graft-versus-host disease
ocu05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100350656 (RLA-DRB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100350656 (RLA-DRB1)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    100350656 (RLA-DRB1)
   04612 Antigen processing and presentation
    100350656 (RLA-DRB1)
   04658 Th1 and Th2 cell differentiation
    100350656 (RLA-DRB1)
   04659 Th17 cell differentiation
    100350656 (RLA-DRB1)
   04672 Intestinal immune network for IgA production
    100350656 (RLA-DRB1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100350656 (RLA-DRB1)
   05164 Influenza A
    100350656 (RLA-DRB1)
   05168 Herpes simplex virus 1 infection
    100350656 (RLA-DRB1)
   05169 Epstein-Barr virus infection
    100350656 (RLA-DRB1)
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    100350656 (RLA-DRB1)
   05152 Tuberculosis
    100350656 (RLA-DRB1)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    100350656 (RLA-DRB1)
   05140 Leishmaniasis
    100350656 (RLA-DRB1)
  09163 Immune disease
   05310 Asthma
    100350656 (RLA-DRB1)
   05322 Systemic lupus erythematosus
    100350656 (RLA-DRB1)
   05323 Rheumatoid arthritis
    100350656 (RLA-DRB1)
   05320 Autoimmune thyroid disease
    100350656 (RLA-DRB1)
   05321 Inflammatory bowel disease
    100350656 (RLA-DRB1)
   05330 Allograft rejection
    100350656 (RLA-DRB1)
   05332 Graft-versus-host disease
    100350656 (RLA-DRB1)
  09166 Cardiovascular disease
   05416 Viral myocarditis
    100350656 (RLA-DRB1)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    100350656 (RLA-DRB1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocu04147]
    100350656 (RLA-DRB1)
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100350656 (RLA-DRB1)
  Exosomal proteins of epithelial cells
   100350656 (RLA-DRB1)
  Exosomal proteins of breast milk
   100350656 (RLA-DRB1)
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 ig Ig_2 DUF202
Other DBs
NCBI-GeneID: 100350656
NCBI-ProteinID: XP_002714652
Ensembl: ENSOCUG00000001396
UniProt: G1SFC3
Position
12:132559571..132565604
AA seq 266 aa
MLCLWLSRGPCLAALTVTLLVLSSYLALARDTRSRFLELVKHECHFSNGTQRVRYIFRDV
YNQEEHVRFDSDVGEFEAVTELGRPDAEYWNSQTDILEDRRTAVDRYCRHNYGVLDSFLV
QRRVVPTVTVYPAKTQPLQHHNLLVCAVSGFYPGHIEVRWFRNGEEEEAGVVSTGLIRNG
DWTFQTLVMLETVPQSGEVYTCQVEHPSVTSPITVEWKAQSESAQSKMLSGVGGFVLGLL
FLGLGLFVYRRNQKGHSGLQPTGLLS
NT seq 801 nt   +upstreamnt  +downstreamnt
atgctgtgtctgtggctctcccgaggcccctgcctggcagctctgactgtgacactgctg
gtgctgagctcttacctggctttggccagggacacccgatcccgtttcctggagctggtt
aaacatgagtgtcatttctccaacgggacgcagcgggtgcggtatatattcagagacgtt
tataaccaggaagagcacgtgcgctttgacagcgatgtgggcgagttcgaagcagtgaca
gaactgggccggccggacgccgagtactggaacagccagacggacatcctggaggacagg
cggaccgcggtggacaggtactgcagacacaactacggggttctggacagcttcctggtg
cagcggcgagttgtgccgacggtgaccgtgtaccctgcaaagacccagcccctgcagcac
cacaacctcctggtctgtgctgtgagtggcttctatccaggccacattgaagtgcggtgg
ttccggaatggagaggaagaggaggctggggtggtgtccacgggcctgatccgtaatgga
gactggaccttccagaccctggtgatgcttgagacagttcctcagagtggagaggtgtac
acgtgccaggtggagcacccgagcgtgaccagccccatcaccgtggaatggaaggcacag
tctgaatccgcacagagcaagatgctgagtggagtcgggggctttgtgctgggtctgctc
ttcctcgggctggggctctttgtctaccgcaggaatcagaaagggcactctggacttcag
cccacagggctcctgagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (24)   
   KEGG PATHWAY (24)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (47)   

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