KEGG   Oryctolagus cuniculus (rabbit): 100351066
Entry
100351066         CDS       T03373                                 
Name
(RefSeq) alpha-actinin-4 isoform X1
  KO
K05699  actinin alpha 1/4
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04510  Focal adhesion
ocu04520  Adherens junction
ocu04530  Tight junction
ocu04670  Leukocyte transendothelial migration
ocu04810  Regulation of actin cytoskeleton
ocu05146  Amoebiasis
ocu05203  Viral carcinogenesis
ocu05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100351066
   04520 Adherens junction
    100351066
   04530 Tight junction
    100351066
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100351066
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    100351066
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100351066
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    100351066
  09163 Immune disease
   05322 Systemic lupus erythematosus
    100351066
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocu04131]
    100351066
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocu04812]
    100351066
   04147 Exosome [BR:ocu04147]
    100351066
Membrane trafficking [BR:ocu04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    100351066
Cytoskeleton proteins [BR:ocu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     100351066
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100351066
  Exosomal proteins of colorectal cancer cells
   100351066
  Exosomal proteins of bladder cancer cells
   100351066
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 XisI
Other DBs
NCBI-GeneID: 100351066
NCBI-ProteinID: XP_051703085
Ensembl: ENSOCUG00000022448
Position
5:2631283..2695492
AA seq 911 aa
MVDYHAANQSYQYGPSSAGNGAGGGGSMGDYMAQEDDWDRDLLLDPAWEKQQRKTFTAWC
NSHLRKAGTQIENIDEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIA
SKGVKLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPY
KNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVTNLNNAFEVAEKYLDIPKM
LDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYER
LASDLLEWIRRTIPWLEDRVPQKTIQEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTL
QTKLRLSNRPAFMPSEGRMVSDINNGWQHLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQ
KASIHEAWTDGKEAMLRQRDYETATLADIRALIRKHEAFESDLAAHQDRVEQIAAIAQEL
NELDYYDSHNVNTRCQKICDQWDALGSLTHSRREALEKTEKQLETIDQLHLEYAKRAAPF
NNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAES
NHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQSKQQSNEHLRRQFASQANV
VGPWIQTKMEEIGRISIEMHGTLEDQLSHLKQYERSIVDYKPNLDLLEQQHQLIQEALIF
DNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMQEFRASFNHFDKD
HGGALGPEEFKACLISLGYDVENDRQGDAEFNRIMSVVDPNHSGLVTFQAFIDFMSRETT
DTDTADQVIASFKVLAGDKNYITAEELRRELPPDQAEYCIARMAPYQGPDAVPGALDYKS
FSTALYGESDL
NT seq 2736 nt   +upstreamnt  +downstreamnt
atggtggactaccacgcggcgaaccagtcgtaccagtacggccccagcagcgcgggcaat
ggcgctggcggcggaggtagcatgggcgactacatggcccaggaggacgactgggaccgg
gacctgctgttggacccggcctgggagaagcagcagcgcaagaccttcacagcctggtgc
aactcccacctgcgcaaggccggcacgcagatcgagaacatcgacgaggacttccgcgac
gggctcaagctcatgctcctgctcgaggtcatttcgggggagcggctccccaagccggag
cgtgggaagatgagagtgcataagatcaacaacgtgaacaaagcgctggacttcatcgcc
agcaaaggggtcaagctggtctccatcggggcggaagagatcgtggacggcaatgcgaag
atgaccctgggcatgatctggaccatcatcctgaggttcgccatccaggatatctctgtg
gaagagacctctgccaaggaggggctccttctgtggtgccagagaaagacggcgccgtac
aagaacgtcaacgtgcagaacttccacatcagctggaaggatggtctcgccttcaatgcc
ctgatccaccggcacaggccagagctgatcgagtatgacaagctgagaaaggatgacccc
gtcaccaacctgaataatgcctttgaagtggccgagaaatacctcgacatccccaagatg
ctggatgcggaagacatcgtgaacacggcccggcccgacgagaaggccataatgacctat
gtgtccagcttctaccatgccttttcgggagcgcagaaggctgagactgccgccaaccgg
atctgcaaggtgctggctgtcaaccaggagaacgagcacctgatggaggattacgagcgg
ctggccagcgatctcctggagtggatccggcgcaccatcccctggctggaggatcgcgtg
ccccagaagacgatccaggagatgcagcagaagctggaggacttccgggactaccggcgc
gtgcacaagccgcccaaggtgcaggagaagtgccagctggagatcaacttcaacacgctg
cagaccaagctgcgcctcagcaaccggcccgccttcatgccctccgagggcaggatggtg
tcggacatcaacaacggctggcagcacctggagcaggccgagaagggctacgaggagtgg
ctgctgaacgagatccgcaggctggagcggctcgaccacctggccgagaagttccggcag
aaggcctccatccacgaggcctggaccgacgggaaggaggccatgctgaggcagcgggac
tacgagacggccaccctggcggacatccgggctctcatccgcaagcacgaggccttcgag
agcgacctggccgcacaccaggaccgcgtggagcagattgcggccattgcccaggagctc
aacgagctggattactacgactcccacaacgtcaacacccggtgccagaagatctgcgac
cagtgggacgccctgggctccctgacccacagccgcagggaggccctggagaaaacggag
aagcagctggagaccatcgaccagctgcacctggagtacgccaagcgggccgctcccttc
aacaactggatggagagcgccatggaggaccttcaggacatgttcattgtccacaccatc
gaggagatcgagggcctcatctccgcccacgaccagttcaagtccaccctgccggatgcc
gacagggagcgagaggctatcctggccatccacaaggaggcccagaggatcgccgagagc
aaccacatcaagctgtcgggcagcaacccctacaccaccgtcaccccgcagatcatcaac
tccaagtgggagaaggtgcagcagctggtgccgaagcgggaccacgcgctcctggaggag
cagagcaagcagcagtccaatgagcacctgcgccgccagttcgccagccaggccaacgtc
gtggggccctggatccagaccaagatggaggagatcgggcgcatctccatcgagatgcac
ggcaccctggaggaccagctgagccacctgaagcagtacgagcgcagcatcgtggactac
aagcccaacctggacctgctggagcagcagcaccagctcatccaggaggcgctcatcttc
gacaacaagcacaccaactacaccatggagcacatccgcgtgggctgggagcagctgctc
accaccatcgcccgcaccatcaacgaggtggagaaccagatcctcacccgcgacgccaag
ggcatcagccaggagcagatgcaggagttccgggcctccttcaaccacttcgacaaggac
catggtggggcgctggggcctgaggagttcaaggcctgcctcatcagcctgggctacgac
gtggagaacgaccggcagggcgacgccgagttcaaccgcatcatgagcgtggttgacccc
aaccacagcggcctcgtgaccttccaagccttcatcgacttcatgtccagggagaccacg
gacacggacacggccgaccaggtcatcgcctccttcaaggtcctggccggggacaagaac
tacatcaccgccgaggagctgcggagggagctgccccccgaccaggccgagtactgcatc
gcccgcatggcgccctaccagggccccgacgccgtgcccggcgccctcgactacaagtcc
ttctccacagccctgtacggcgagagcgacctgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (95)   
   KEGG ORTHOLOGY (1)   
   RefGene (90)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (130)   

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