KEGG   Oryctolagus cuniculus (rabbit): 100353007
Entry
100353007         CDS       T03373                                 
Name
(RefSeq) transcription factor COE4 isoform X1
  KO
K09103  early B-cell factor
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ocu03000]
    100353007
Transcription factors [BR:ocu03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   HLH domain only
    100353007
SSDB
Motif
Pfam: COE1_DBD COE1_HLH TIG
Other DBs
NCBI-GeneID: 100353007
NCBI-ProteinID: XP_051701160
Ensembl: ENSOCUG00000023917
Position
4:17357512..17428135
AA seq 705 aa
MARARGQAPGSGARRRPRRGGAGAGPRGESAGLLLLLLLQVLPPGAAAGPGRRGTRGAGG
GVCWPGAAPVFPRDARLLLLLPPPPLPPLSPPPPPPPRSAPAASASRMDALARGGLSLKE
EPLLPASLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPPSNLRKSNFFHFVLAMYD
RQGQPVEVERTAFVDFVEKEREPGAEKTNNGIHYRLRLVYNNGLRTEQDLYVRLIDSMSK
QAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSDPVIIDRFFLKFFLKCNQ
NCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEAATPC
IKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELITPHAIRVQTPPRHIPGVV
EVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAA
DLAEALYGVPSSNQELLLKRAADVAEALYSAPRAPAPLSSLAPSHPHPAVVGINAFSSPL
AIAVGDATPGAEAGYARSCSSASPRGFAPSPGSQQSSYGSGLGTGLGGYGAPGMASLGVP
GSPSFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSFSPVNMISAVKQRSAFA
PVLRPPSSPPQACPRAHGEGLPDQSFEDSDKFHSPARGLQGLAYS
NT seq 2118 nt   +upstreamnt  +downstreamnt
atggcccgggcccgcggccaggccccggggagcggcgcgcggcggcggccgcggcggggc
ggcgcgggagccgggccccggggggagtcggccgggctgctgctgctgctgctgctccag
gtgctgccgcccggggctgccgcagggccggggcgccggggcacgcggggcgccggcggc
ggcgtctgctggcccggcgctgcccctgtctttccccgggacgcgcggctgctgctgctc
ctgccgccgccgccgctgccgccgctgtcgccgccgccgccgccgccgccgcgctccgcg
cccgcagcctccgcctcccggatggatgctctggcccgcggcgggctgagcctgaaggag
gagccgctgctgcccgccagcctgggctcggtgcgctcttggatgcagggtgcgggcatc
ttggacgccagcaccgcggcgcagagtggcgtgggcctggcacgagcccattttgagaag
cagcctccctccaacctcaggaaatccaacttcttccacttcgtgctggccatgtacgac
cggcaggggcagcccgtggaagtggaacgcacagccttcgtcgactttgtggaaaaggag
cgagagcctggagccgaaaagaccaataacgggatccattaccgcctccggctggtgtac
aacaatggacttcggacggagcaggacctctacgtgcgtctcatcgactccatgtccaag
caggccatcatctacgaggggcaggacaagaaccctgaaatgtgccgggtgctgctcacc
cacgagatcatgtgcagccggtgctgtgaccggaagagctgtggcaaccggaacgagacc
ccctcggaccccgtcatcattgacaggttcttcctgaagttcttcctcaaatgcaaccag
aactgcctgaagaatgcggggaacccccgggatatgcgccgcttccaggtggtggtgtcc
acgaccgtgagcgtggacggacacgtcctggccgtgtccgacaacatgtttgtgcacaac
aactcgaagcacggccgcagggcccgccgcctggacccttctgaagctgccaccccttgc
atcaaggccatcagccccggggagggctggaccacaggcggtgccaccgtcatcgtcatc
ggcgacaacttcttcgacgggttgcaggtcgttttcggaaacgtgctcgtatggagcgag
ctcatcacaccccacgccatccgggtgcagacacccccacgacacatccccggagtggtg
gaggtgaccctctcctacaagtcaaagcagttttgcaagggagcccccggccggtttgtg
tacacagccctgaacgagcccaccatcgactacggattccagaggctgcagaaggtcatc
cccagacaccccggagaccccgagagactgcccaaggaagtgcttttgaagcgggcggcc
gacctagctgaggctctgtacggagtgcccagcagtaaccaggagctcctcctgaagcgc
gcagccgacgtggccgaagccctgtacagcgccccccgcgcgcccgcgcctctcagctcc
ctggccccaagccacccgcaccccgccgtcgtgggcatcaacgctttcagcagcccgctg
gccatcgccgtgggggacgccacgccgggagccgaggcgggctacgcgcgcagctgcagc
agtgcgtcgccgcgcgggttcgcgcccagccccggctcgcaacagagcagctacggcagt
ggccttggaactggccttggcggctacggcgcgccaggcatggctagcctcggtgtgccc
gggtcccccagcttcctcaacggctccacggccacgtcgcccttcgccatcatgccctct
agccccccgctggcggctgcctcctccatgtccctcccggccgctgcccccaccaccagc
gtcttctccttctcgcctgtcaacatgatctccgccgtcaaacagaggagcgccttcgcc
cccgtgctgcgcccacccagctccccaccccaggcctgccccagagcccacggagagggg
cttccagaccagtcttttgaggattctgacaagttccactctccagcccgggggctccag
ggcctggcgtactcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (11)   
   RefSeq(nuc) (5)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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