KEGG   Oryctolagus cuniculus (rabbit): 100353025
Entry
100353025         CDS       T03373                                 
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase
  KO
K01873  valyl-tRNA synthetase [EC:6.1.1.9]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    100353025 (VARS1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ocu01007]
    100353025 (VARS1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ocu03016]
    100353025 (VARS1)
Enzymes [BR:ocu01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     100353025 (VARS1)
Amino acid related enzymes [BR:ocu01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   100353025 (VARS1)
Transfer RNA biogenesis [BR:ocu03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    100353025 (VARS1)
 Prokaryotic type
    100353025 (VARS1)
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 GST_C tRNA-synt_1g tRNA-synt_1_2 Val_tRNA-synt_C GST_C_2 tRNA-synt_1e Jag_N CPT_N
Other DBs
NCBI-GeneID: 100353025
NCBI-ProteinID: XP_051710894
Ensembl: ENSOCUG00000022463
Position
12:135142752..135155614
AA seq 1264 aa
MSILYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRICLQPPPTSRTPFPPPRLPAL
EQGPGGLWVWGATAVSQLLWPAGLGGSGGSQAAVLVQQWVSYADTELIPAACGATLPALG
LRSPAQDPQAALGALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYVLDPSA
RQVWGNVTRWFLTCVQQPEFRAVLGEVVLYSGARPFSQQPGPEVAAPPKTAAQLKKEAKK
REKLEKFQQKQKMQQQQPPPGEKKPKPEKKEKRDPGVITYDLPTPPGEKKDVSGTMPDSY
SPQYVEAAWYPWWEQQGFFKPEYGRPSVSTPNPRGVFMMCIPPPNVTGSLHLGHALTNAI
QDSLTRWHRMLGETTLWNPGCDHAGIATQVVVEKKLWRERGLSRHQLGREAFLQEVWKWK
EEKGDRIYHQLKKLGSSLDWDRACFTMDPKLCEAVTEAFVRLHEEGVIYRSTRLVNWSCT
LNSAISDIEVDKKELTGRTLLPVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIET
MLGDVAVAVHPEDSRYQHLKGKSVRHPFLSRSLPIVFDDFVDMAFGTGAVKITPAHDQND
YEVGQRHGLEAISIMDSRGALVNVPPPFLGLPRFEARKAVLAALKEQGLFRGVQDNPMVV
PLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIRDWC
ISRQLWWGHRIPAYFVTVNDPAVPPGEDPDGRYWVSGRSEAEAREKAAKEFGVTPDKISL
QQDEDVLDTWFSSGLFPFSILGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKL
TGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHEQLLNSNLDPSEVE
KAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFA
LRGLGKDFVPSPTSQPGGHESLVDRWILSRLAEAVKLSNHGFQTYDFPAVTTSQYSFWLY
ELCDVYLECLKPVLNGEDQAAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRAP
QTPPSLCVTPYPEPSECSWKDPEAEAALELALSITRAVRSLRADYNLTRIKPDCFLEVAD
EATGALASAVAGYVQALASAGVVAVLAPGAPAPQGCAVALASDRCSIHLQLQGLVDPARE
LGKLQAKRGEAQRQAQRLQERRATPGYSVKVPLEVQEADEAKLQQTEAELRKVDEAITLF
QKML
NT seq 3795 nt   +upstreamnt  +downstreamnt
atgtccatcctttacgtctcccctcaccccgatgccttccccagcctccgggccctcata
gctgctcgctatggggaggctggagagggaccaggatggggaggagcccacccccgaatc
tgtctccagccgcccccaaccagtaggacgccctttcccccaccccgcctgccagccctg
gagcaggggcccggtgggctgtgggtgtggggggccacggctgtgtctcagctgctgtgg
ccagcgggcctcgggggctctgggggcagccaggcggctgtcctcgtccaacagtgggtc
agctacgccgacacggagctaataccggctgcctgtggggctacgctgccggccctggga
ctgcgaagcccagctcaggacccccaggctgccctgggagccctgggcagggccttgagc
cccttggaggagtggctccgtctgcacacctacctggctggggaggcccccacgctggct
gacctggcagctgtcacagccctgctgctgccgttccgatatgtcctggacccctcggcc
cgccaggtctggggtaacgtgacccgctggttcctcacgtgcgtccagcagccggaattc
cgcgccgtgttgggagaagtggttctgtactcgggggccaggcccttctctcagcagcca
ggccctgaggtggctgcacccccaaagacagctgctcagctcaagaaagaggcaaagaag
cgggagaagctagaaaaattccaacagaagcagaaaatgcagcagcagcagcccccccca
ggggagaagaaaccaaaaccagagaagaaggagaaacgggatcctggggtcatcacctat
gacctcccaaccccacccggagagaagaaagacgtcagtggcaccatgcctgactcatac
agcccgcagtacgtggaggccgcctggtacccttggtgggagcaacagggcttctttaag
ccggagtatgggcgtcccagcgtgtccacgcccaacccccgaggggtcttcatgatgtgc
atcccaccccccaacgtgacgggctccctgcacctgggccacgcgctcaccaacgccatc
caggactccctgactcgatggcaccgcatgcttggggagaccacgctgtggaaccctggc
tgtgaccacgcgggcattgccacacaggtggtggtggagaagaagctgtggcgagagcgg
ggcctgagccggcaccagctgggccgcgaggcctttctgcaggaggtctggaagtggaag
gaggagaaaggtgaccgcatttaccaccagctgaagaagcttggcagctccttggactgg
gaccgagcctgcttcaccatggaccctaaactctgcgaagctgtgacggaggcttttgtt
cggcttcacgaggaaggcgtcatctaccgcagcacccggctcgtcaactggtcctgcacc
ctcaactcggccatctccgacatcgaggtggacaagaaggagctgacgggccgcaccctg
ctccccgtgcctggctacaaggagaaggtggagttcggggtcctcgtgtcctttgcctac
aaggtccaaggctcagacagtgacgaggaggtggtggtggcaacgactcggatcgagacg
atgctgggcgatgtggctgtggctgtgcacccagaagattccagataccagcacctgaag
gggaagagcgtgaggcacccgttcctgtcgcggagcctgcccatcgtcttcgatgacttc
gtggacatggcatttggcacaggtgcagtgaagataacccctgcccacgaccagaatgac
tacgaggtggggcagcggcacgggctggaggccatcagcatcatggactcccgaggggcc
ctggtcaacgtgcccccacctttcctgggcctgcccaggtttgaggccaggaaggcggtg
ctggctgcgctgaaggagcagggactgttccgtggcgtccaggacaaccccatggtggtg
ccgctttgcaaccgctccaaggacgtggtggagcctctactgcggccacagtggtacgtg
cgctgcggggagatggcccaggccgccagcgctgccgtgacccggggtgacctccgcatc
ctgcccgaggcccatcagcggacttggcacgcctggatggacaacatccgggactggtgc
atttcccggcagctgtggtggggccaccgcatcccggcctacttcgtcaccgtcaatgac
cctgcggtgccccctggggaggaccccgacgggcggtactgggtgagtggacgcagcgag
gcagaggcccgcgagaaggcggccaaggagtttggtgtgacacctgacaagatcagtctg
cagcaagatgaggatgtattggacacctggttctcctctggcctctttcccttttccatc
ttgggctggcccaaccagtcagaagacctgagtgtgttctacccggggacactactggaa
acaggccacgacatcctcttcttctgggtggcccggatggtcatgctcggcctgaagctc
accggcaggctgcccttcagagaggtctacctccacgccatcgtgcgagacgcccatggc
cggaagatgagcaagtctctaggcaacgtcatcgaccccctggatgtcatccacggagtc
tccctgcagggcctccatgagcagctgctgaacagcaacctggatcccagcgaggtggag
aaggctaaggaagggcagaaggcggacttcccggcggggattcctgagtgtggcaccgac
gccctccggtttggactgtgcgcctacacatcccaaggccgtgacatcaacctggacgtg
aaccggattttgggttaccgccatttctgcaacaaactttggaatgccaccaagttcgcc
ctccgtggcctggggaaggatttcgtgccctcgcctacctcccagcccgggggccacgag
agcctggtggatcgctggatcctcagccggctggcggaagccgtgaaactcagcaaccat
ggtttccagacctatgacttcccagctgtcaccacctcccaatatagcttctggctctat
gagctctgtgatgtctacctggagtgcctgaagcccgtcctgaacggcgaggaccaggcg
gcggccgagtgtgcgcgccagaccctctacacctgcctggacgttggcctgcggctgctg
tcacccttcatgccctttgtgaccgaggagctgttccagaggctgccccgacgggcacca
cagaccccccccagcctctgcgtcaccccgtaccccgagccctccgagtgctcctggaag
gaccctgaggcagaagccgccctcgaactggcgctcagcatcacgcgagctgtgcggtcc
ctgcgtgccgactacaacctcacccgcatcaagcccgactgtttcctggaagtggccgac
gaggccacgggcgccctggcgtcggcagtggcgggctacgtgcaggcactggccagcgcg
ggtgtggtggcagtcctggcgccgggagctcccgcaccacagggctgtgccgtggccctg
gcctctgaccgctgctccatccacctgcagctgcaggggctggtggacccggcccgggag
ctgggcaagctgcaggccaagcgaggcgaggcccagcgtcaggcccagcggctgcaggag
cgccgggccaccccaggctactctgtcaaggtgcccctcgaagtccaggaggcagatgaa
gccaagctccagcagacagaagcagagctcaggaaggtggacgaggccatcaccctgttt
cagaagatgctgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (10)   
   Pfam (10)   
All databases (60)   

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