KEGG   Orrella dioscoreae: ODI_R0132
Entry
ODI_R0132         CDS       T05133                                 
Name
(GenBank) DNA-directed RNA polymerase beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
odi  Orrella dioscoreae
Pathway
odi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:odi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ODI_R0132
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:odi03021]
    ODI_R0132
   03400 DNA repair and recombination proteins [BR:odi03400]
    ODI_R0132
Enzymes [BR:odi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ODI_R0132
Transcription machinery [BR:odi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ODI_R0132
DNA repair and recombination proteins [BR:odi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ODI_R0132
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2
Other DBs
NCBI-ProteinID: SOE46105
UniProt: A0A1C3K706
Position
I:complement(130451..134563)
AA seq 1370 aa
MPYSFTEKKRIRKSFAKREDVQNVPFLLATQLQSYLTFLQADASPSARKDEGLQAAFSSI
FPIVSHNQMARLEFVSFVLGEPVFDVKECQQRGLTYASPLRAKVRLVLLDREVSKPTVKE
VKEQEVYMGEIPLMTGTGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARV
IPYRGSWLDFEFDPKDILFFRVDRRRKMPVTILLKSIGMTNEAILAHFFEFDSFELKAEG
AMMEFVSDRWKGEVARFDVTGRDGKVIVEKDKRVNAKHLREMSAAEISRISVPEDFLVGR
VLAKNIVDADTGEVVANANDEITETLLATLREAGVREIQTLYTNDLDRGPYISQTLRTDE
TVDQMAARVAIYRMMRPGEPPTEEAVEALFQRLFYSEDAYDLSRVGRMKVNSRLGRGDDI
TGPLTLTNEDIVETIKVLVELRNGRGQIDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLSQAETENLMPHDLINSKPISAAIKEFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSMALYARLNEYGFLETPYRKI
IDGRVSDQIEYLSAIEESRYVIAQANATLDEEGRFADDLVACREAGETMLTSGANVHYMD
VAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPVVGTGIERTVAVDSGT
TVQALRGGVVDHVDAERVVIRVNDEENVAGEVGVDIYNLIKYTRSNQNTNINQRPIVQRG
DRVAKGDVLADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISENVVAEDRYTSIHIE
ELTVVARDTKLGPEEITRDISNLPETQLNRLDESGIVHIGAEVRADDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMVGTVIDVQVFTREGIVRDKRAQSIIDDELR
RYRQDLNDQLRIVENDTFDRIEKTLVGKAVNGGPRKLAKGATITKEYLVDLDRWQWFDIR
LADEAHAVVLEQAKESLEQKRHQFDLAFEEKRKKLTQGDELPPGVLKMIKVYLAVKRRLQ
PGDKMAGRHGNKGVVSRIVPVEDMPHMADGTPADIVLNPLGVPSRMNVGQVLEVHLGWAA
KGVGYRIADLLRDEQKVEVKKIRTYLDKVYNSTGTGARIEELSDTEVLEMASNLKRGVPF
ATPVFDGATEEEIGKMLELAYPDEVAERLQLTDTRAQAWLFDGRTGEKFERPVTVGYMHM
LKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLQEMLT
VKSDDINGRTKVYENIVKGDHTIDAGMPESFNVLVKEIRSLALDMDLERN
NT seq 4113 nt   +upstreamnt  +downstreamnt
atgccttactcgttcaccgaaaaaaagcgcatccgcaaaagctttgccaagcgtgaagac
gtccagaacgtcccgtttctgctggcaacccaactgcaatcctacctaactttcctgcag
gcggatgcgtcgccttcggcacgcaaggacgaaggcctacaggccgcgttctcttccatt
ttcccgatcgtcagccataaccagatggcccgtctcgagttcgtcagcttcgtgctgggc
gaaccggtattcgacgtgaaggaatgccaacagcgcggcctgacctatgcgtcgccgctg
cgcgccaaagtgcgtctggtcctgctcgaccgcgaggtcagcaagcccacggtgaaggaa
gtcaaagagcaggaagtgtacatgggcgaaattccgctcatgaccggcaccggctcgttc
gtcatcaatggcaccgagcgtgtcatcgtctcgcagctgcaccgttcgcctggcgtgttc
ttcgaacacgaccgcggcaagacccacagctcgggcaagctgctgttctcggcccgcgtg
attccctaccgcggttcgtggctggacttcgagttcgacccgaaggacatcctgttcttc
cgcgtcgaccgtcgccgcaagatgcccgtgacgatcctgctgaagtccatcggcatgacc
aacgaagccatcctggcgcacttcttcgagttcgacagcttcgagctgaaggccgaaggc
gcgatgatggaattcgtgtccgaccgctggaagggcgaagtggcccgtttcgacgtgacc
ggccgtgacggcaaggtcatcgtcgagaaggacaagcgcgtcaacgccaagcacctgcgc
gaaatgtcggccgccgagatctcgcgcatctccgtgcccgaagacttcctggtcggccgc
gtgctggccaagaacatcgtcgacgccgacaccggtgaagtcgtggccaacgccaacgac
gaaatcaccgagaccctgctcgccacgctgcgcgaagccggcgtgcgtgaaatccagacg
ctgtatacgaacgacctggatcgcggtccctacatctcgcaaaccctgcgcaccgacgaa
accgtcgaccagatggctgcccgcgtggccatctaccgcatgatgcgccccggcgagccg
cccaccgaggaagccgtcgaagcgctgttccagcgcctcttctacagcgaagacgcatac
gacctgtcgcgcgtcggccgcatgaaggtcaacagccgcctgggtcgcggcgacgacatc
accggtccgctgacgctgaccaacgaagacatcgtcgagaccatcaaggtgctggtcgag
ctgcgtaacggccgtggccagatcgatgacatcgatcacctgggcaaccgtcgcgtccgc
tgtgtgggcgaactggccgagaaccagttccgcgccggcctcgtgcgtgtcgaacgcgcc
gtcaaggagcgtctgagccaggccgagaccgagaacctgatgccgcacgacctgatcaac
tccaagccgatttccgcggccatcaaggagttcttcggttcgagccagctgtcgcagttc
atggaccagaccaacccgctatcggaaatcacgcacaagcgccgcgtctcggccctgggc
ccgggcggtctgacgcgcgagcgcgccggcttcgaagtccgagacgtgcacccgacccac
tacggccgcgtctgcccgatcgaaacgccggaaggcccgaacatcggcctgatcaactcg
atggcgctgtatgcgcgcctgaacgagtatggcttcctggaaaccccgtaccgcaagatc
atcgacggccgcgtcagcgaccagatcgaatatctgtcggccatcgaggaaagccgctac
gtgatcgcccaggcgaacgcgacgctggacgaagaaggccgtttcgccgacgacctcgtg
gcttgccgcgaagcgggcgaaacgatgctgacctcgggcgcgaacgtgcactacatggac
gtggcgccgtcgcagatcgtgtccgtggctgcctcgctgatcccgttcctcgagcacgac
gacgcgaaccgcgcgctgatgggctcgaacatgcaacgccaggccgtgccttgcctgcgt
ccggaaaagcccgtcgtgggcaccggcatcgagcgcaccgtcgcggtcgactcgggcacc
accgtgcaggcgctgcgtggcggcgtggttgaccacgtcgacgccgagcgcgtcgtgatc
cgcgtcaacgacgaggaaaacgtcgccggcgaagtgggcgtggacatctacaacctgatc
aagtacacgcgttccaaccagaacacgaacatcaaccagcgccccatcgtgcaacgcggc
gaccgcgtcgccaagggtgacgtgctggctgacggcgcctcgaccgacctgggcgagctc
gcgctgggccagaacatgctgatcgcgttcatgccctggaacggctacaacttcgaagac
tcgatcctgatctccgaaaacgtcgtggccgaagaccgctacacctcgatccacatcgag
gaactgacggtcgtcgcgcgtgacacgaagctcggaccggaagaaatcacccgcgacatc
agcaacctgccggaaacccagctcaaccgcctggatgagtcgggcatcgtgcacatcggc
gccgaagtgcgcgccgacgacgtgctggtcggcaaggtcacgcccaagggcgagacccag
ctgacgccggaagagaagctgctgcgcgcgatcttcggcgagaaggcgtcggacgtgaag
gacacctcgctgcgcgtgccctcgggcatggtcggcacggtcatcgacgtccaggtcttc
acgcgtgaaggcatcgtgcgcgacaagcgcgcccagtcgatcatcgacgacgaactgcgc
cgctatcgccaggacctgaacgaccagctgcgcatcgtcgagaacgacaccttcgaccgt
atcgagaagacgctggtcggcaaggccgtcaacggcggtccgcgcaagctggccaagggc
gccacgatcaccaaggaatacctggtggatctggaccgctggcagtggttcgacatccgc
ctggccgacgaagcccacgccgtggtgctggagcaggccaaggagtcgctcgagcagaag
cgccaccagttcgacctggccttcgaagagaagcgcaagaagctgacgcaaggcgacgag
ctgcccccgggcgtgctgaagatgatcaaggtctacctggccgtgaagcgtcgtctgcag
cctggcgacaagatggccggccgtcacggcaacaagggtgtggtgtcgcgcatcgtgccg
gtggaagacatgccgcacatggccgacggtacccccgccgacatcgtgctgaacccgctg
ggcgtgccttcgcggatgaacgtcggccaggtgctggaggtccacctgggctgggccgcc
aagggcgtgggctaccgcatcgccgacctgctgcgcgacgagcagaaggtcgaggtgaag
aagatccgcacctacctggacaaggtctacaactcgaccggcaccggtgcccgcatcgaa
gaactctcggacaccgaagttctggaaatggcgagcaacctgaagcgcggcgtgcccttc
gcgacccccgtgttcgacggcgcgaccgaagaggaaatcggcaagatgctggagctggcc
taccccgatgaggtggccgagcgtctgcaactgaccgacacgcgcgcccaggcctggctg
ttcgacggccgtaccggcgagaaattcgagcgtccggtcaccgtgggctacatgcacatg
ctgaagctgcaccacttggtcgacgacaagatgcacgcgcgctccaccggcccgtactcg
ctcgtcacccagcagccgctgggcggcaaggcgcagttcggcggtcagcgtttcggggaa
atggaagtgtgggccctcgaagcctacggcgcctcgtacacgctgcaagagatgctcacg
gtcaagtccgacgacatcaacggccgcaccaaggtttacgaaaatatcgtcaagggcgac
cacacgatcgacgccggcatgcccgagtcgttcaacgtgctggtcaaggaaatccgttcc
ctcgccctcgacatggatctggagcgtaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

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