KEGG   Olea europaea var. sylvestris (wild olive): 111402459
Entry
111402459         CDS       T05244                                 
Name
(RefSeq) protein CHROMATIN REMODELING 8 isoform X1
  KO
K10841  DNA excision repair protein ERCC-6
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    111402459
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oeu03036]
    111402459
   03400 DNA repair and recombination proteins [BR:oeu03400]
    111402459
Chromosome and associated proteins [BR:oeu03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    111402459
DNA repair and recombination proteins [BR:oeu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Other TCR factor
      111402459
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII HDA2-3
Other DBs
NCBI-GeneID: 111402459
NCBI-ProteinID: XP_022886549
Position
1:34538293..34545325
AA seq 1217 aa
MEEEEEDMVLLSTLGVTSANPEDIERDILEKAGKNAEDKSETGRDGDEELHNQTKSNKTL
STVHENLYNKLRAVEIEINAVTSAVEQLESFKRHDDIFSEGEDERKQGPADIEKDYLGAS
PNDVTLQHALAADRLRSLIKTKAQLEKEILDSSNDIKDNKLLRDLVKEEPKTTRKLKEIQ
KTSKKKNKNKRLKTVSFVEDDDFDAVLNVASTGFVETERDELVRKGVLTPFHRLQGFERR
IEEPEPSSRHRVAEDVNSNNNLASSSVDRALRSISEAAQARPTTKLLDPESVPKLEAPTH
PFQRLKAPLKISQSLETETVKDKDGKRKKKRPLPSKKWRRLASREENEEADAITSSFEED
DLEAIEDVEDEGPSFVTLEGGLRIPETIFSKLFDYQKVGVQWLWELHCQRAGGIMGDEMG
LGKTIQVLAFLGSLHFSRMYKPSIVICPVTLLRQWKREAMKWYSRFHVEILHDSAQEMTS
KKKRSKSNESDNESDESLDSDSEGKISSKSPKRWDALIYRVLTSESGLLITTYEQLRLLG
DKLLDIEWGYAILDEGHRIRNPNAEITLVCKQLQTVHRVIMTGAPIQNKLSELWSLFDFV
FPGKLGVLPVFEAEFAVPISVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNA
HLPKKTEHVLFCSLTPGQRSVYRAFLASSEVEQIFDGNRNSLYGIDVMRKICNHPDLLER
EHSQGNPDYGNPERSGKVKVVAQVLKVWKEQGHRVLLFSQTQQMLDILENFLVADGYNYR
RMDGLTPVKQRMALIDEFNNSADVFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQ
ARERAWRIGQRKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPRQRRFFKARDMKD
LFTLNEDENGLSTETSSIFGQLLEEVAVVGAQKNKQGKPDSEKASKSNPNGSTTDLGHNS
EANGEETAGPGDVDEDTSFLRSLFDAHGIHSAVNHDAILNAHDEDKTKLEEEASQVAQRA
AEALRQSRILRNQESITVPTWTGKSGAAGGPPSVRRKFGSTVNSQLVTNSRPLEDVPNNE
ASRPYQITAGTSSGKALSSTELLAKIRQNQETAVGDGLEHQFGMASTSGGRERSASNGPS
RSSNTFGSQPEVLIRQICTFIQRKGGSTDSVSIVEHFKDRIPSKDLPLFKNLLKEIAILK
KNPNGSFWVLKAEYQEQ
NT seq 3654 nt   +upstreamnt  +downstreamnt
atggaagaagaggaggaagatatggttttgctcagcactttaggtgttacgtctgcaaat
cctgaagacattgaacgtgacattttagaaaaggcaggaaaaaatgctgaagacaaaagt
gaaactggaagggatggagatgaggagcttcacaatcaaaccaaaagcaacaaaacacta
tctactgttcatgaaaatttgtacaacaaattgagagctgttgaaattgaaataaatgct
gttacatctgctgttgaacaattagagagcttcaaaagacatgatgatattttctctgaa
ggtgaagacgaaaggaagcagggacctgcagatattgaaaaagattatcttggggcatct
ccaaatgatgtgacccttcagcatgctctcgctgcagatcgattaagaagcttgataaaa
acaaaggctcaacttgagaaagaaattttggattcttccaatgacattaaggataacaag
ttgttaagagatcttgtcaaggaagagcctaaaaccacacgaaagttgaaggagattcag
aaaacaagcaagaaaaagaacaagaacaaaaggttgaaaacagtttcattcgttgaagat
gatgattttgatgctgttctaaatgtggcctctacagggtttgtggaaacagaaagggat
gagttagttcggaaaggagttttaactccgtttcacaggcttcaaggctttgaacgccgt
atagaggaaccagaaccatccagcaggcacagggtagctgaagatgtaaacagtaataac
aatcttgcttcatctagcgtagatagagctcttcggtcaatatcagaggctgcacaagct
cgccccacaactaagttgcttgatccagaatcagtcccaaaacttgaggctcccacccat
ccttttcaaaggctaaaagctcccttgaaaatctctcagtccctggaaactgagacagtg
aaggataaagacggcaaaagaaagaagaaaagaccattgccatcaaagaagtggcgaagg
ctagcttctcgagaggaaaacgaagaagctgatgcaatcacctctagttttgaagaagac
gatttggaagctatcgaagatgtggaggatgaaggaccctcatttgtgacacttgaaggg
gggctgagaatcccagaaacaatttttagcaagctttttgactatcagaaggttggagta
cagtggttatgggaactacattgtcaaagggcaggcggaataatgggagatgagatgggt
cttggtaaaaccatccaggttttagctttccttggatcattgcatttcagtagaatgtac
aaaccaagcattgttatttgtcctgttaccctcttgcggcagtggaagagagaagctatg
aaatggtattcgagatttcatgtggagatattacatgactctgctcaggaaatgaccagt
aagaaaaagcgatcaaaatcaaatgaaagcgataatgaaagtgatgaatcgcttgatagt
gatagtgaaggaaaaatatcttctaaaagtcccaaaagatgggacgctctgatatatcgt
gttttgacgtcagaatctggtctgctgatcaccacttatgaacaacttcggttgctaggt
gataaattgcttgatattgaatggggatatgccattttagatgaaggacataggattcga
aatccaaatgctgaaatcactcttgtttgcaaacagttgcagactgttcatcgtgtaata
atgacgggtgcacctattcaaaacaaactgtctgagttgtggtccttgtttgatttcgtc
ttccctggaaagctgggtgtcttacctgtttttgaggccgaatttgctgttcccatatct
gttggtggttatgctaatgcaactcctttgcaagtttctactgcttacagatgtgctgtg
gttctacgtgacttgatcatgccttacctcctccggcggatgaaggctgatgtgaatgct
catcttccaaagaagactgaacatgtcctcttttgcagtctcactccagggcagcgatct
gtatatcgtgcttttcttgctagctctgaggttgaacaaatttttgatggaaacaggaac
tctctttatggaattgatgtgatgcgtaagatttgcaaccatcctgatctacttgagaga
gaacattctcaagggaatccagactacggaaatcctgaacgtagtggaaaagtgaaggtg
gttgctcaagtgcttaaggtgtggaaggagcagggacatcgtgttcttcttttttcacaa
actcaacagatgcttgatattcttgagaattttttggttgctgatggatataattacagg
agaatggatggtctcactcctgtaaaacagagaatggctctgatagatgaatttaacaat
tctgcggatgtgttcgtttttattttgacgacgaaggttggtggtttgggaacaaacttg
actggtgccaacagggtgatcatttttgaccctgactggaacccctcgactgatatgcag
gcccgggaacgtgcttggcgtattggtcaaagaaaggacgttacagtttatagattgatt
actcgtggaacaattgaagagaaggtgtatcacaggcagatctacaaacatttccttacc
aataaaatattgaagaatccacgtcagagaagatttttcaaagctcgtgatatgaaggat
cttttcacgttaaatgaggatgaaaatggtctctctacagaaacatctagtatttttggt
cagttgttggaagaagtagctgttgtaggggcccaaaaaaataaacagggtaagccagat
tctgagaaagcttccaaatcaaatcctaatggttccacaactgacttggggcataattca
gaggctaatggtgaagaaacagccggtcctggtgatgtagatgaagatacaagctttctg
cggagtctttttgatgctcatgggattcacagtgctgtgaaccatgacgccatcttgaat
gctcatgatgaagacaagacaaagcttgaggaagaagcttcccaagttgcacagagagct
gctgaagcactgcgccagtcacgaatacttagaaaccaagaaagtataacagttccaacc
tggaccggaaaatcaggtgctgctggtggaccaccatctgtcagaaggaaatttgggtca
actgttaattcccaattagtaaccaattcaaggccattggaagacgtaccaaataatgaa
gccagcaggccatatcagattactgctgggacatcgtcaggtaaagcattgtcctcaact
gagttgctggctaagattagacaaaaccaagaaacagcagttggtgatgggcttgagcat
cagtttggcatggcttcaacttctggtggccgtgaaagatctgcaagtaatgggccttct
agatcatcgaacaccttcggatcgcagccagaagttttgattcgtcaaatttgtacattt
atccaacggaaaggtggaagcacagattcagtcagcattgtcgagcatttcaaagacagg
ataccatcaaaagatctaccactatttaagaatcttctaaaggagatagctattttaaag
aaaaaccctaatgggtccttttgggttctgaaggcggagtaccaggagcagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (4)   
   Pfam (4)   
All databases (39)   

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