KEGG   Olea europaea var. sylvestris (wild olive): 111410462
Entry
111410462         CDS       T05244                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03018  RNA degradation
oeu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111410462
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111410462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oeu03019]
    111410462
   03041 Spliceosome [BR:oeu03041]
    111410462
Messenger RNA biogenesis [BR:oeu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     111410462
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     111410462
Spliceosome [BR:oeu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    111410462
SSDB
Motif
Pfam: LSM DUF150_C Hfq KNOX2
Other DBs
NCBI-GeneID: 111410462
NCBI-ProteinID: XP_022896571
Position
15:21369118..21373403
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEATEFLRDPEDPLKT
TDQTRRLGLIVCRGTAVMLVSPTEGTDEIANPFVQPEGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtctggaagaaaagaaacagtgttggatctagcaaagtttgttgataagggtgtccaa
gtcaagctcactggtggaagacaagtgactggtacactaaaaggatatgaccaattgttg
aatcttgtgttggatgaagcaacagagtttcttagagaccctgaggatccactgaagact
actgatcagaccaggcgtcttggcttaatagtttgtagagggactgctgtgatgctcgtc
tcccccactgaaggaacagacgagattgccaatccatttgtccagccagagggggcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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