KEGG   Oryzias latipes (Japanese medaka): 100049285
Entry
100049285         CDS       T02443                                 
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform 5
  KO
K12897  transformer-2 protein
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100049285 (tra2b)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ola01009]
    100049285 (tra2b)
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ola03041]
    100049285 (tra2b)
Protein phosphatases and associated proteins [BR:ola01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100049285 (tra2b)
Spliceosome [BR:ola03041]
 Common components
  Common spliceosomal components
   SR proteins
    100049285 (tra2b)
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_3
Other DBs
NCBI-GeneID: 100049285
NCBI-ProteinID: NP_001098179
UniProt: Q6I6X4
Position
21:complement(20143919..20149108)
AA seq 183 aa
MSNRRRHIGNRANPDPNACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRG
FAFVYFENTPDAKEAKEKANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGGGGGGG
GPGGPRRHSRDNDRGYDRGYDRGYDRYDDRDGYRSYRRRSPSPYYRGAYRSRSRSRSYSP
RRY
NT seq 552 nt   +upstreamnt  +downstreamnt
atgtctaaccgccgcagacacattggcaaccgtgccaatcctgacccaaatgcctgcctg
ggagtttttgggctgagcttgtacactacagagagggatctgaaagacgtcttctctaaa
tatggccctctggcagatgtctctatagtatatgaccagcagtcaaggcgctccaggggt
tttgcatttgtttactttgaaaacacacctgatgctaaagaggcaaaagagaaagccaac
ggcatggagctggacggtcgtaggatcagggtagatttctccatcaccaaaagaccgcat
accccaacacctggaatctatatgggacgacctacttatggaggaggaggaggaggagga
ggtcctggtggtcctcgacggcactcgcgagacaatgatcgtggatacgatcgtggctat
gaccgaggctacgatcgctatgacgacagagatggctatagatcttacaggcgacgatct
ccatcaccatactacagaggagcctacaggtctagatcaaggtcgcgctcctattctccc
cgtcgatattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (16)   
   RefSeq(nuc) (2)   
   GenBank (7)   
   EMBL (7)   
Protein domain (3)   
   Pfam (3)   
All databases (45)   

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