KEGG   Oryzias latipes (Japanese medaka): 100049440
Entry
100049440         CDS       T02443                                 
Name
(RefSeq) Her6.2
  KO
K06054  hairy and enhancer of split 1
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03460  Fanconi anemia pathway
ola04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    100049440
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    100049440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ola03000]
    100049440
   03400 DNA repair and recombination proteins [BR:ola03400]
    100049440
Transcription factors [BR:ola03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Hairy, Hairy/E(SPL)
    100049440
DNA repair and recombination proteins [BR:ola03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     100049440
SSDB
Motif
Pfam: Hairy_orange HLH
Other DBs
NCBI-GeneID: 100049440
NCBI-ProteinID: NP_001098284
UniProt: Q1L7T3
Position
17:complement(5595705..5597893)
AA seq 231 aa
MPTGPLERPAGAPEKVRASSESRKSSKPIMEKRRRARINESLAQLKSLILDALKKDSCRH
SKLEKADILEMTVKHLRNLQRLHVSAAVHSDPSVLSKYRAGFSECVGEVTRFLSSYEGVN
SEARTRLLSHLASCVSQIHTVNVCGPHPGAPGQSAALLPAASGPQTTKSCSQMPASTDTI
TLFAGFQVVPSPDGQFSLLVPSAGLTPLGMHSGGAPAAAPALTSDSVWRPW
NT seq 696 nt   +upstreamnt  +downstreamnt
atgcccaccgggcccctggagagaccggccggcgcgccggagaaagtgcgcgcctcgtct
gagagcaggaagtcttccaaacccatcatggagaaacgcaggcgagcgcgcatcaacgag
agcctggcgcagctgaagagcctcatcctggacgcgttgaagaaagacagctgcagacac
tccaagctggagaaggcggacatcctggagatgaccgtcaagcacctgaggaacctgcag
cgtctgcacgtgagcgcggcggtgcactccgacccgtccgtcctgagcaagtacagagcc
ggattcagcgagtgtgtcggagaagtgacccgcttcctgtcgtcgtatgaaggggtgaac
tctgaggccagaactcgcctcctcagccacctggcctcctgcgtgagccagatccacact
gtaaacgtgtgtggaccgcatccaggcgctccaggacagagcgccgccctgcttcctgcg
gcgtcgggcccacagacgaccaaaagctgctcccagatgcctgcctccacagacactatt
acactgtttgctggcttccaggtggtgccatccccagatggacagttttctctgcttgtt
cccagtgcaggcctcaccccactgggcatgcacagcggcggagcgccagccgctgcgccc
gccctcacttcagacagtgtgtggaggccgtggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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