KEGG   Oryzias latipes (Japanese medaka): 101154983
Entry
101154983         CDS       T02443                                 
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
  KO
K15516  fragile X mental retardation protein
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ola03019]
    101154983
Messenger RNA biogenesis [BR:ola03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     101154983
   Factors involved in mRNA localization
    Other mRNA localization factors
     101154983
   mRNA cycle factors
    Stress granule specific factors
     101154983
SSDB
Motif
Pfam: FXMRP1_C_core KH_9 Tudor_FRX1 FXR_C1 KH_1 Agenet DUF150_C
Other DBs
NCBI-GeneID: 101154983
NCBI-ProteinID: XP_011486075
UniProt: H2M7P4
Position
18:28854091..28868104
AA seq 674 aa
MDGLAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPADYHKEIG
EGDEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPLNPNTP
SSRNTFYKVPIAVPEDLRDICANDNVHKDFRKAIGANCIFYSAPTHELIVLSTNETTVKR
ATLLSDMHFRSIRTKLILMSRNEEATKHLETSKQLAAAYQEEVRVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEESCTFRIYGETPEAVKQAREYLEFKEDYFQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDKKLPREEVGRQGAGRDDTAGGGKEGMVPFVFVGTKEN
ISNAQALLEYHVSYLQEVEQLRLERLQIDEQLRQIGVGYRAAPGRSGGPGPDREKGYLTD
ESSNSLHASRTYGGRGRGRRASNSQYSGYGTNSELSNASEPEDGAEREQRPRGLGGEERG
SRRGGRGRGATSGRGRGGPAAKPSSTISSVLRDPDSNPYSLLEGEGEQADADIGDGAGGE
RRRRSRRRRNDQEPSVMDAATESDGQAAPSENGLDEDARPQRRNRSRRRRNRGGRPEGGS
GSRDRQPGESVTVADYISRPESQSRQNLPQQENHAEPKENGTSAKKDEQTPSKRSPSKGV
SSAGDSLTLVNGVS
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggacgggctggccgtggaggttcgcggctccaacggggccttctacaagggttttatc
aaagacgtccatgaagactccctcacaatcgtttttgaaaacaactggcagccagagaga
cagttgcccttcagcgacgtgcggttgccccccccagccgactaccacaaggaaatcggg
gagggtgatgaggtggaggtgtactccagggccaacgaacaggagccatgcggctggtgg
ctggcgcgggtcagaatgatgaagggcgagttctacgtaatcgaatatgcggcgtgcgac
gccacatacaacgagatcgtcacatcggagcggatcagaccgctgaaccccaacacccct
tcctctagaaacactttttacaaagtccccatcgccgtcccagaagacctgagggacatc
tgtgcaaacgacaacgttcacaaagacttcaggaaagccatcggagcaaactgcatcttc
tacagcgcgccaacgcacgagctcatcgtgttgtcgaccaacgagacgacggtgaagcgg
gccactctcctgagcgacatgcatttccgtagcatccgcaccaagctcatcctaatgtcg
cgaaacgaggaggccaccaaacatttggagaccagtaaacagctagcagccgcgtaccaa
gaggaggtcagagtccgagaggacctgatgggcctcgccatcgggtctcacggcgccaac
atccagcaagcgaggaaagttcctggtgtcacggccatcgagctggaggaggagagctgc
acgttcaggatctacggagagacccccgaggcggtgaaacaggcccgagagtatctggag
tttaaagaagactacttccaggtgcccaggaaccttgtaggcaaagtcatcggaaagaac
ggcaaagtcatccaggaaatcgttgacaagtcgggcgtggtccgagtccggatcgaggga
gacaacgacaaaaagcttccccgggaggaggtaggcaggcagggggccggcagagacgac
actgccggcggcggcaaagaggggatggtgcccttcgtgtttgtgggaaccaaggagaac
atcagcaacgcccaggctctgctggagtaccacgtctcctacctccaggaggtggagcag
ctgcgcctggagcgcctccaaatcgatgagcagctccggcagatcggagtcgggtaccgg
gctgctcccggacgaagtggtggcccaggaccagatcgcgaaaagggctacctcacggat
gagagcagcaactcgctgcacgcgtctcgcacctacggcggccgtggccgtggacgccga
gcctccaactcccagtactccggatacggcaccaactccgaactgtccaacgcctctgag
ccggaggatggcgccgagcgagagcagaggcccagagggttgggcggcgaagagagaggc
tcccggcggggcggcaggggccgaggcgccacctcagggcgagggcgaggggggccggcg
gctaagccttccagcaccatcagctcagttctgagggacccggacagcaacccctactct
ctgctggagggggagggagagcaggccgacgcagacatcggcgacggcgccggaggagag
cgccgcagacgctcgcgccgccgccgcaacgaccaggagccaagcgtgatggatgctgcc
acggagtctgacggccaggcagcccccagcgagaacgggctggacgaggacgctcgacct
cagcgccgcaaccggagccgccggcgccgcaaccgtggcgggcgcccagagggagggtcc
ggcagtcgtgaccggcagccaggggagagcgtgacggtcgccgactacatatcccggccc
gagtcgcagagccggcagaatcttccccagcaggagaaccacgccgagcccaaggaaaac
ggcaccagcgccaagaaggacgagcagacgccctccaagcgctcccccagcaaaggcgtg
agctccgccggcgacagcctgactctggtcaacggcgtctcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (35)   

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