KEGG   Oryzias latipes (Japanese medaka): 101157355
Entry
101157355         CDS       T02443                                 
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X3
  KO
K11857  ubiquitin carboxyl-terminal hydrolase 47 [EC:3.4.19.12]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ola01002]
    101157355 (usp47)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    101157355 (usp47)
Enzymes [BR:ola01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     101157355 (usp47)
Peptidases and inhibitors [BR:ola01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   101157355 (usp47)
Ubiquitin system [BR:ola04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    101157355 (usp47)
SSDB
Motif
Pfam: USP47_C UCH UCH_1 Ubiquitin_2
Other DBs
NCBI-GeneID: 101157355
NCBI-ProteinID: XP_020569696
Position
3:complement(20331510..20353227)
AA seq 1365 aa
MEMVPSEETQFVPKEIHNAAEEPRVLCIIQDTTSAKTVNERLTLNLPASTTLSKLYEDVA
HKAGYIKGTFDLAWGNVLDMAPLEHNSEMSLSESGFDSGGKRNFLQLTDRDGEQPQIASD
ESGAADSSGLEDSSQERFIGPLPRDGSACGSGDYSSPSYSYSSILSKSDTGYVGLVNQAM
TCYLNSLLQTLYMTPEFRNALYNWEFEDSEEDPVTSIPYQLQRLFVLLQTSKKRAIETTD
VTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECG
YESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARK
GLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFIDVEDEKSPQTESCT
DSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTSSTERAFKPKSLLTFELFSVMVHSGS
AAGGHYYACIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYM
LIYRLKDPSRNSKFLAVEDFPNHIKSLVQKEKESEEQEKRQREIERNTCKIKLFCVHPVK
MMIESKLEVHKDKTLREATEMAYKLMELEGVVPLDCCRLVKYDEFHEYLERSYEGEEDTT
MGILLGGVKSSYMFDLLLETRRPEQVFQPYKPGEVMVKVHVVDLKSETIAPPISVRAYLN
QSITEFKQLIDQATGLPAETMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSEL
TDHQVPFTDSLLWKLLDRHGNTIRLLVLLPEQSPGTLAIRPLCQKGGEDSDGAFEGSQGN
RKSVEAILEESTEKLKNLSLQQQQQGSSTSDSQKSSDTSDFEHIESPTQDADSNSSLCVA
ADNRELENRIRATPGGSGGASSDNENQFACEERSDSEVNNDRSTSSVDSDILSSSHSSDT
LCNADSGPIQLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDDNGKSKTEFK
YLYFRAEPYSQDDASWETQKCLVVYVDKRITLAAFKQNLEPYVGVPSTQFKVFRVYANNQ
EFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLLDTVFAKGM
TVRQSKEELLPQLKEQCRLDLSIDRVRLRKKTWKNPGTVFLDYHVYEEDISISSNWEVFL
EVLNEPEKMKSMSQLAVLTRRWSPSTMKLGPFQEVILESSSVEELKEKLSEISGIPLENL
EFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVVFYRDSTEETLELSED
ERNELMKKESSRLLKTGYRVSYSPRKEKALKIYLDGGPVKDPGQD
NT seq 4098 nt   +upstreamnt  +downstreamnt
atggaaatggtgcctagcgaggagacccagttcgtacccaaagagatccacaatgcagct
gaggagcccagggtgctgtgcatcattcaggacaccaccagtgcaaagacggtcaatgag
aggctgaccctcaacttgccagcttccaccactctctccaaactctacgaggacgtcgct
cacaaagctggatacataaaaggcacttttgacctcgcctggggaaacgttctggacatg
gctccactggaacataacagtgagatgtcgctttcagagtctggatttgattcgggcggg
aagaggaatttcctccagctcacggatagagacggagaacagcctcaaattgcatcggat
gagtctggagcggcagatagcagtggcctggaggacagttcccaggagcgatttattggt
cccctaccaagagatggcagtgcatgtggcagtggtgactacagcagtccatcgtattca
tactcatctatcctcagcaaatcagatacaggttatgttggcttggttaaccaagcaatg
acttgttatttaaatagccttctgcaaacactctacatgacccccgagtttagaaatgca
ctctacaactgggaatttgaggattctgaggaggatcctgtcaccagtattccctaccag
ctgcaaaggctattcgttttgctccagacaagtaagaagcgggcaatcgagaccacagac
gtaacgcggagctttggctgggacagcagcgaggcttggcagcaacacgatgttcaggag
ctatgcagggtcatgttcgatgccttagagcagaagtggaagcagacagagcaggctgat
ctgatcaaccagctgtaccaggggaagctgaaggattatgttcggtgtttggagtgtggc
tacgaaagctggagaattgacacgtacctggacatccctcttgtgatcagaccctttgga
gctagccaggcatatggcagtgtggaggaagctttgcaagcattcatccagccagaaacc
ctggacgggccaaaccagtacttttgtgaacgctgtaaaaagaaatgcgatgcacgaaag
ggtttaaggtttctgcactttccctacctgctgactttacagctgaaaaggtttgacttt
gactacaccactatgcatcgcatcaagcttaatgatcgcatgacttttcctgaggagctt
gacatgagtccattcattgatgtggaagatgagaagtcaccacagacagagagctgcact
gatagtggagccgagaatgaaggcagttgtcacagtgaccaaatgagcaacgatttctcc
actgatgactgcgtggatgagggcatctgcttggacagcaccagcagtacagagagggct
tttaagccaaagagcttgctgacctttgagctgttctcagtcatggtccattcggggagt
gctgcaggtggccactactacgcctgcatcaaatctttcagtgacggccagtggtacagt
ttcaacgatcagcatgttagcaagattacacaagatgatatcaggaaaacttatggtgga
tcctcagggagcagaggttactattccagtgcctttgcaagctccacaaatgcatacatg
ctgatttataggttgaaagatccttcaagaaattcaaagtttctagctgtagaagacttc
ccaaatcacataaagagcttggttcagaaggagaaagagtctgaggagcaggagaaacgc
cagagggagatcgagcgcaacacatgcaagatcaaacttttctgcgtgcatcctgtgaag
atgatgatagagagcaagttggaagttcacaaggacaaaactctcagagaagcaacagaa
atggcctacaagctaatggagctggaaggtgttgtccctctggactgctgtcgcttggtg
aagtacgatgagtttcatgagtacctggagcgatcgtacgaaggtgaggaagacactacg
atgggaattctcctcggaggtgtaaagtcttcgtacatgttcgacttgctgctggagacc
cggagaccagagcaagttttccagccttacaaacctggagaagtgatggtgaaggttcat
gtggtggatctgaagagtgagaccatcgcgcctccaatcagtgtccgagcatacttgaac
cagtcaatcacagaatttaaacagcttattgatcaggctacaggactgcctgcagaaacg
atgcgagtggtcttggagcgctgttacaatgacctaagactcctttatgttccaaacaaa
accctcaaagctgagggattcttcaggagtaacaaggtttttgtggagagctccgagctg
actgatcatcaggttccatttactgactcattgttgtggaaactgttggatcgtcacgga
aacacaatccgtctgttagtcctgctgcctgagcagtctcctggtaccctggccatcaga
cctctttgccagaaaggaggagaggactctgatggggcctttgaggggtcacagggcaac
aggaaatctgttgaggccatcctcgaagagagcacagaaaagttgaagaatctctcgctg
cagcagcagcagcagggctccagcaccagcgacagccagaaaagctctgacaccagtgac
tttgaacatattgaatccccaactcaagacgctgactcaaactcctccctctgcgtcgct
gcagacaacagagaattagaaaacaggatcagggctacaccagggggcagcggcggcgcc
tcctctgataacgagaaccagtttgcctgcgaagagcgatcagactcggaggttaacaac
gaccgcagcaccagctcagtggacagtgatattctgagttccagccacagtagcgacacc
ctgtgtaacgcagacagcggccccatccagctggccaatggcctggattcacacagcatc
accagcagccgacgctccaaagcccacgagggcaaaaaagagacgtgggacaccgccgag
gaagactctggaacagacagtgaatacgacgacaacggaaagagcaagacagaatttaag
tatctgtacttcagagcagagccttactcacaggatgacgcttcgtgggaaacacaaaaa
tgtttagtggtttatgtggacaagaggataacattggcagccttcaaacagaacctggaa
ccctacgttggcgttccctctacccagttcaaggtctttcgtgtgtatgccaacaaccag
gagtttgagagtgtgcggctcaacgaaacactctcatctttctctgacgacaacaagata
accattcgacttggaagagctcttaaaaagggtgaatacagagttaaagtctaccagctg
cttgtgaatgaaccagagccctgcaagttccttttggacacggtgtttgccaaaggcatg
actgtcagacagtccaaagaagagctgctgcctcagttgaaagagcagtgcaggcttgac
ctcagcattgacagggttcgtctcaggaaaaagacatggaagaatccaggcactgtgttt
ttggattaccacgtctatgaggaggacatcagcatttcctccaactgggaggtcttcttg
gaagtccttaatgaaccagagaaaatgaagtcaatgtcacagctggctgttctgacccgg
cggtggagcccctctacgatgaagctcgggcctttccaggaggtgattctggagagcagc
agtgtcgaggaactcaaagagaagctcagtgaaatcagtggcattcctttggaaaatctg
gagtttgcaaagggcaggggaacttttccatgtgatatatctgtgttggagatccatcag
gatttagactggaatcctaaggtgtcaacacttaatgtgtggcctctttacatctgtgat
gatggagctgtggtcttttacagggatagcacagaggaaactcttgagttgtccgaggat
gagcgtaatgagctgatgaagaaggagagcagccgcctcctcaagaccggataccgtgtc
agctactctccacgtaaagagaaggccctgaagatctacctggatggcggccctgttaaa
gacccaggacaagactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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