KEGG   Oryzias latipes (Japanese medaka): 101157610
Entry
101157610         CDS       T02443                                 
Symbol
prdm2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
  KO
K11432  [histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:2.1.1.355]
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola00310  Lysine degradation
ola01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ola00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    101157610 (prdm2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ola03000]
    101157610 (prdm2)
   03036 Chromosome and associated proteins [BR:ola03036]
    101157610 (prdm2)
Enzymes [BR:ola01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.355  [histone H3]-lysine9 N-trimethyltransferase
     101157610 (prdm2)
Transcription factors [BR:ola03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    101157610 (prdm2)
Chromosome and associated proteins [BR:ola03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     101157610 (prdm2)
SSDB
Motif
Pfam: PRDM2_PR zf-C2H2 zf-C2H2_4 SET zf-C2H2_6 zf-C2H2_jaz zf-C2H2_9 zf-C2HC_2 zf-C2HE
Other DBs
NCBI-GeneID: 101157610
NCBI-ProteinID: XP_011473104
UniProt: H2LG85
Position
5:complement(8412681..8434987)
AA seq 1677 aa
MAASGAVVESLEEIPAHVWKGLPASLNLGPSAINQNRIGVWATQGIPKGKRFGPFVGEKK
KRSQVTSNVYMWEVYFPSRGWMCIDATDPMKGNWLRYVNWARSSKEQNLFPLEINRAIYY
KVLKPIRPGEELLVWYTVEDNPEITAALEEERANSLNRKNSHRAKQAARRKVLEKARQAG
SGGFKTTSGTEATIKEMWDGGEGVKEDDRTSETSRGPEVHPPESTDNKGAQNVSETLMET
GTWEEEDEEEEEEDEDEEEEDGDDSQETAHQTSQQLNAADYTQSKQSGPSCDGGSLAVSQ
VKLKSSSVAAHDPDFEPGGELESDAHGESYPCPHCERRFSTRQGLERHAHIHGISYQQAQ
VFRCQYCNKSFGSQVGRRRHERRHEGGSKKRPGSLAGASSSLISPVAQTDSSPDCTSPAT
HYIAIGFSGGHVQKPELQRKELGAGAERPLTLEENGESKELHPCKYCNKAFGTHTNMRRH
QRRIHERHLLPKGVRRKGMLFQEASMQQRPGESPSTSPPPVYVPSADTEDEADRDDYTVD
ISKNISENLSFYIDGKIVSTGAVSNCEVIEVDSRSAALFGLDTVIISPNQLSQALKVEAR
ATSAKQISSSGQPAAKRRTSTPPLVTGLKVETETTPSSSSTSSKLLVGGIFQQSTDSAAF
QREKTVYLSPKLKQLLQTQDFQKSTITLITDSHRLTSPLAVSPLQGASGKFKRRTTSPPS
SPQLSPAGKTESCKGDALSAHTLKVPKLESHSVPPPEDVQDQDEDALSPSGNVTHSQSSS
GSGGNSCNQQPLDLSNSVGRQTDIVNKVLGDSALDLSLHCKSIVEPEIKGNSAPQSLTKK
RKPNTSMLEKVLMNEYASLTLPAEDGPFALAGLSRLSSCSPNVTSESAHPSPPSLTPVTI
NPSSPGASSATSPTPPPPVLPTIPSPPAMPSSPRSQPSDSPAHRPLPVLSPKMSPRVDGQ
KLQSDSENFLDDKDEDENRIPDLLDSLNSSLEAPPRPSAGPRSPEPTAEDLSSLEKVSHL
ASCSSKLNGGTADTEASLKSDSDAALPLSSPSSPPVAQESSLSSVSQSLCLIKVKEEPQS
CEDYSPVKSDSLQDGVDSSPLPHPAKTSEAEEINSVYCKIFLCNVCEEPFNSIKELSAHI
TEHAADWPFKCEFCVQLFEDAPALLAHRTTLHGVGKIFVCSACSKEFAFLCNLQQHQQDL
HPNEACSHSTVENGKLRPHNYTDPSRAKEESSPSTPSQETADENAPQTDSDSPQQEPSVN
GDHAEDSNEELYTTIKIMASEGGKPRGPDVRLGINQHYPSYKPPPFPYHSRSHAGSVASA
TNFTTHNIPQTFSTAIRCTKCGCSFDNMPELHKHILACASASDKKRYTPKKNPIPLKQIV
KSPNGVVSPVVVAGQSAFRRMGQPKRLNFNQDAVKTKMNALSKKRNQLVQKAISQRNKTA
ATAAKKSFVKTEAELASSVCPHCSREFTYTASLTKHMAVSCPMKPAVAKRGKKGLAEVKK
EVISVLDKNTSKKKPVDPEAQTEVEAKPLVKTRTRSSGGTNTESFQGSKRKAAAAVGRLK
RTALSPVPVSPNKRNKKSQTKTLPPTIPALDPPADGAPRPAVRTSRPAIGKKPAAMKLAE
TTQQLKKEERFSLRMRERMGGPVTRSSQMANTLPPAEVKSEEASLEEPKDSQDVLMK
NT seq 5034 nt   +upstreamnt  +downstreamnt
atggctgcttctggggcagtggtggagtctctggaggaaattccagctcatgtttggaaa
ggtttgcctgccagtctgaatctgggaccttcggctataaatcaaaatcgcattggtgtc
tgggcaacacaaggtattcctaagggcaagcggtttggtccttttgttggagagaagaaa
aagaggtcccaggtcaccagcaatgtgtacatgtgggaggtttatttcccgtctcgagga
tggatgtgcatcgatgccacagatccaatgaaggggaactggctgcgatatgtgaactgg
gctcgctccagtaaagagcagaatctttttccacttgagatcaacagagccatttactac
aaagttttaaagcctatccggcccggagaggagctgctggtgtggtacaccgtggaagac
aaccctgagataacagctgctctggaggaagaaagagccaacagtctgaacaggaaaaac
tcgcacagggcgaagcaagcagccagaagaaaagttctggaaaaagccagacaggctggt
tcaggtggatttaaaacgacaagcggaaccgaggccactatcaaggagatgtgggacgga
ggagaaggtgtgaaggaggatgacaggacatccgagacctctcgggggccagaagtccac
cccccggagagcactgacaataaaggagcgcagaatgtctcagaaacattaatggagact
ggaacctgggaggaagaagatgaggaggaggaggaggaggatgaagacgaggaggaggaa
gatggtgacgacagtcaggaaacggcacaccaaacctctcaacagttaaatgcagctgat
tacacgcaaagcaaacaatctggcccgtcatgtgacggaggaagcctcgcagtttcacag
gtgaagttgaaaagctcctcggttgctgcacatgatcccgattttgagcccggtggtgag
ctggagagcgatgcacacggagagtcgtacccctgtcctcactgcgagcgccgcttctcc
accagacagggccttgagcgtcacgcgcacattcatggcatcagttaccagcaagcccaa
gtcttcaggtgccaatactgcaataagtctttcggttcacaagtggggcgacggcggcac
gagagaaggcatgaaggcggctccaagaaaaggccgggttccctggctggagcttcttcc
agcttaatcagccctgtagctcaaactgactcgagtcctgactgcacgagcccagcgacg
cactatatagctattgggttctcaggaggacatgtgcagaagccagagctgcagagaaag
gagttgggagcaggtgctgaacgacctttgactttggaagaaaacggcgagtcaaaggag
ctgcatccctgcaagtactgtaataaagcctttggcacgcacacaaacatgcgcagacac
cagcgcaggatccatgaaaggcacttgctacccaaaggggttcgcaggaaaggtatgctg
tttcaagaggcgtcgatgcagcagcggcctggcgagtctccaagcaccagccctcctcct
gtctacgtgcccagcgcggacacagaggatgaggcggacagagacgattacacagtcgac
atatccaaaaatatatccgaaaatctgagcttctacattgacggaaagattgtgtccacc
ggtgcagtaagcaactgtgaggtgatagaggtggactcgcgctctgcagctttgtttggt
ttggacaccgttattatcagcccaaaccagctcagccaggcgctcaaagtggaggccaga
gcgacttctgctaaacagatctccagcagcgggcagccagcagcaaaaaggagaacatcc
acacctcctctggttactggtctcaaagtggaaacagaaacgacgccatcatcctcatct
acatcctctaaattgttagtgggaggaatattccaacaaagcactgattcagcagctttt
caacgggagaaaacagtctacctttcgccgaaactaaaacagctgcttcagacacaagac
ttccagaaatccaccatcaccctcatcacagacagccacaggctgacctcgccgctggcg
gtctctccgctgcagggggcgtcggggaaattcaagagaagaaccacatctcctccatca
tctccacagctcagtcctgctggtaaaaccgaaagctgtaaaggagatgcattgagtgca
cacaccctcaaggtgccaaagttagaaagtcacagtgtgcctccacctgaggacgtccag
gatcaagatgaagatgcactgagcccctctggaaatgtaacacacagccagtcttcctca
ggcagtggagggaattcctgtaaccagcagcccttggatttgtccaattctgtcggcagg
caaactgatattgtaaacaaagtgctcggagattctgctctggatttaagtttacattgt
aagagcattgtggaacctgaaataaagggaaactcggcacctcagtctttaacaaagaag
aggaagcccaacaccagtatgcttgaaaaggtgttgatgaacgagtacgccagtctgact
ctgcccgccgaggacggcccctttgctctggcaggcctgagtcgactgagttcttgttct
ccaaatgttacatcagagtctgcccacccatctccaccatctttgaccccagttaccatc
aacccatcgtctccgggcgccagcagtgcaacatctccgacaccccctccccccgttctt
cccaccataccgtccccaccggctatgccgagctctccgcggtcccagccgtctgactcg
cctgcacacagacctctacccgttctctccccgaaaatgtctccaagagtcgatggacaa
aaactccagtcagactctgagaatttcctagacgacaaagatgaagatgagaaccgtatc
cccgatttattagactctttaaacagttcacttgaagccccccctcgtccttctgcgggt
ccacgttctcctgaacctacggctgaagatctgtcctctctagaaaaggtttctcacctc
gcaagttgcagctctaagctaaatggcggcactgcagacacggaggcgtctttgaaatct
gactcagatgctgctcttccactgtcatctccttcatctcctcctgtggcacaggagtct
tcgctgtcctccgtttctcagtccctctgtctgatcaaggtaaaagaggagcctcagtcc
tgtgaagactactctcctgttaaaagcgattctcttcaggatggcgttgattcatctcca
ctgcctcatcctgctaaaacctcagaggcagaggaaatcaactctgtgtactgcaaaatt
tttctgtgtaatgtctgcgaggagccgtttaattccatcaaagagctgagcgctcacatt
acagaacacgccgccgactggcccttcaagtgtgaattttgcgtgcagctgtttgaggat
gctcctgcgctgctagctcaccgcaccacactacacggggtgggcaagatcttcgtgtgc
tccgcctgttccaaagagttcgccttcctctgtaacctccagcagcaccaacaggatctg
cacccaaacgaggcctgttcacacagcaccgtggagaacggaaaactcaggccgcacaat
tacacggacccatccagagccaaagaggagagcagcccctccacgccatcgcaagagacg
gcggacgaaaacgctcctcaaacagactctgattcaccgcagcaagagccgagcgtgaac
ggagatcacgccgaggactcaaacgaggaactctacactacaataaagatcatggcctct
gaaggaggaaagcctagaggtccagatgttcgcctcggcattaaccaacactaccccagc
tataagccccccccctttccctatcacagccgctcccatgccggttcggtggcttctgct
acaaacttcactacacacaacataccccagaccttcagcactgccatccgctgcaccaaa
tgtggctgcagcttcgacaacatgcccgaactgcacaagcatatcctcgcctgcgccagt
gccagcgacaagaagcgttatactcccaagaaaaatcccattcccctcaagcaaatagta
aagagtccaaatggagtggtgtcccccgttgtggtggcgggacagagtgctttccgcagg
atgggtcagccaaagaggctcaactttaaccaggatgcagtcaaaacaaaaatgaacgcc
ctcagtaaaaagagaaaccagctggtgcagaaagccatctcgcagagaaataaaacggcc
gccaccgccgcaaagaagagttttgtcaaaacagaagcggagctcgcctccagcgtgtgc
ccccactgcagtcgggagttcacctacactgcgagtcttaccaagcacatggccgtcagc
tgtcccatgaaacctgctgtcgctaaaaggggcaagaaagggctggcagaggtgaagaag
gaggtcatttccgtgctggataaaaacacgagcaagaaaaaacctgtagaccccgaggct
caaacagaggttgaagctaagcctttggttaaaaccaggacccgtagctcaggtggaacc
aataccgaatcctttcaggggagcaaaaggaaagccgctgctgcggtgggccggctaaaa
aggacggctttatctccggtgccagtgtctcctaacaaaaggaacaagaaaagtcagact
aaaacactacctcccaccattccagccctagaccctcccgctgatggggcgccacggcca
gccgtcagaacgtcacgcccagcaatcgggaagaagccagcagccatgaaattagcagaa
actacacaacagctaaagaaggaggagaggttctccttacgaatgagggagcgaatggga
ggtccagtcaccaggagttcacaaatggctaacactcttcctccagcagaggtgaaaagt
gaggaagcatcacttgaggagccaaaagactctcaggacgtgttgatgaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (63)   
   KEGG ORTHOLOGY (1)   
   RefGene (59)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (9)   
   Pfam (9)   
All databases (96)   

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