KEGG   Oryzias latipes (Japanese medaka): 101160313
Entry
101160313         CDS       T02443                                 
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
  KO
K04857  voltage-dependent calcium channel L type alpha-1S
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04010  MAPK signaling pathway
ola04020  Calcium signaling pathway
ola04260  Cardiac muscle contraction
ola04261  Adrenergic signaling in cardiomyocytes
ola04270  Vascular smooth muscle contraction
ola04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:ola00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    101160313
   04020 Calcium signaling pathway
    101160313
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    101160313
  09153 Circulatory system
   04260 Cardiac muscle contraction
    101160313
   04261 Adrenergic signaling in cardiomyocytes
    101160313
   04270 Vascular smooth muscle contraction
    101160313
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ola04040]
    101160313
Ion channels [BR:ola04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   101160313
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel DUF2670
Other DBs
NCBI-GeneID: 101160313
NCBI-ProteinID: XP_011473534
Position
5:complement(20248824..20278798)
AA seq 1509 aa
MDAINHISGVEAPVGEKGGGFDMKALRAFRVLRPLRLVSGVPSLQVVMNSILKSMLPLFH
ITLLVFFMVTIYSIMGLELFKCKMHKTCYYVGTDIIASVDNEKPAPCAQAGNGRKCLING
TECRAGWPGPNNGITHFDNLGFSMLTVYQCITTQGWTDVLYWVNDAIGMEWPWIFFTTLI
LVGSFFVLNLVLGVLSGEFTKEREKAKSRGEFQKLRETQQLDEDLKGYMDWITQAEVIDN
DNDRQGLLPLENGNSEAGSVGQMDTMQLIIFYYKLARKWNRWLRRKCRVYVKSKLFHWWV
IILVLLNTLAIATEHHKQSQRLTNWQETTNKLLLSMFALEMFMKMYALGLPPYFMSLFNR
FDCFVVSIGILELILVHMGVMSVMGISVLRCIRLLRLLKVTRYWTSLSNLVASLLNSVRS
IACLLLLLFLFIVIFSLLGMQVFGGKFNFPNQPQPRSTFDSFPQALITVFQILTGEDWNT
VMYDGILAHGGPTMPGILVSLYFIILFVCGNFILLNVFLAIAVDNLAEAESLTLAQKEKA
EEKKRKKALRPNISDKATEEKALLAKKLAEQRAKGVEGIPTTAKLKIDEFESNVNEIKDP
FPPADFPGDDEEEDPAIPESPRPRPMADLQLKEEAVPMPEASSFFIFGPQNKFRKLCHRI
INATTFTNIILLFILLSSISLAAEDPIDPVSPRNQVLAYADIVFTSVFTAEIVLKMTTYG
AILHKGSFCRNSFNILDLLVVSVSLLSMGMESSAISVVKILRVLRVLRPLRAINRAKGLK
HVVQCVFVAVKTIGNIVLVTMLLDFMFACIGVQLFRGKFYSCTDPDQMTEETCKGWYIRY
QEGALHEMEVRKREWTNAQLNFDNIFNGMLSLFTISTFEGWPKILYKAIDSNMEDKGPIY
NNRVAISIFFIIYLILIAFFMMNIFVGFVIVTFQEQGEQEYKDCELDKNQRQCVQYALKA
RPLRCYIPKNPYQYQVWYIVTSCYFEYLMFLLIMLNTMCLGMQHCNQSDHVTHLSDMLNV
IFTVLFTVEMILKLMAFKAKGYFGDPWNVFDFVIVIGSVVDVMLSEIDGALASSGGLYCL
HGCSEVDPMQAIAASENMSVSITFFRLFRVMRLVKLLNRSEGIRNLLWTFIKSLQALPYV
ALLILMLFFIYAVVGMQVFGKIALMDGTFINRNNNFQTFPQAVLLLFRCATGEAWHEVML
ACMYGKKCDPKSDFLPGEENTCGSNFAIIYFMSFYMLCAFLIINLFVAVIMDNFDYLTRD
WSILGPQHLDEFKKIWAEYDPEATGRIKHLDVVTLLRRIPPPLGFGKFCPHRIACKRLVS
MNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANEELRGIIKKIWKRTSMKLLDQVI
PPIGDDEVTVGKFYATFLIQDYYRKLKKRQEEYYGYHPTKKSATHEIQAGLRNIAEEAPA
ELHRSISGDLLAEEDSDHGVEEIFRRQASLFGNHSDPFAVETDPAYTSQRPLQMDEGFTN
NISMSQSQF
NT seq 4530 nt   +upstreamnt  +downstreamnt
atggatgcaatcaaccacattagtggagtggaggctccggttggagaaaaaggtggtggc
tttgacatgaaagctttgagggcttttagagtcctccggcccctcagactggtctctgga
gtccccagtctacaggttgtgatgaactccatcctgaaatccatgctccctttgtttcac
atcaccttactggtattcttcatggtgaccatttactccatcatgggactggaactcttc
aagtgtaaaatgcacaagacctgttactatgttggcacagacatcattgcatcagtggac
aatgagaagccagctccttgtgctcaggcagggaacggtcgaaaatgcctcattaatggg
acagagtgccgagctggatggccagggcccaacaatggaattacgcactttgacaacctt
ggattttccatgttaacagtctatcagtgcatcaccacacaagggtggaccgatgtcctg
tactgggtaaatgatgccataggaatggaatggccgtggatctttttcaccactctcatc
ctggtgggctcattttttgtgctcaatctggttcttggtgttctcagtggggaattcact
aaagaacgtgaaaaggccaaatccagaggagagtttcagaaactgagagaaacccaacag
ctggatgaggacctgaagggctatatggactggatcacgcaggcggaagtcattgataac
gataacgacagacagggtctgctgcctttggaaaatgggaattcagaagctgggagtgtt
ggtcagatggacaccatgcagctgatcatcttctactataagcttgctcgtaagtggaat
cgctggttgcggcggaaatgcagagtgtatgtgaagtccaagttgttccactggtgggtc
atcattctcgtcttgctcaacacactggcaatagcaacagaacaccacaagcagtcccag
agactgaccaactggcaagagaccaccaacaagcttcttctgtccatgtttgccctggag
atgttcatgaagatgtatgctctgggtttacccccctatttcatgtctctcttcaaccgc
tttgactgctttgttgtgtccattggcatcctggagctcatcctcgtccacatgggcgtc
atgtcagtcatgggcatctcagtgctccgctgtataaggctgctgcgcctgctcaaggtc
accagatactggacatcgctcagtaatctggtggcttctctcctgaactccgtgcgctct
atcgcctgcttgctcctcctcctcttcctctttattgtcatcttctccctgttgggcatg
caggtctttggaggaaagtttaactttcccaatcaaccccagcctcgcagtaccttcgac
agctttcctcaggctctcatcactgtgttccagattctgacaggtgaggactggaataca
gtaatgtatgatggtattttggctcatgggggtccgaccatgcctggcatcctcgtcagc
ctctacttcattatactcttcgtctgcggaaactttatccttctgaatgtttttcttgcc
attgctgtcgacaacctggcagaagcggagtctctgactttagctcaaaaagagaaagca
gaggagaaaaaacgcaagaaagcattgaggccaaacatttctgacaaggccacagaagag
aaagctcttctggcaaagaagctggcagagcaacgagccaaaggggtcgagggcattcca
acaactgctaagctcaagattgatgagtttgaatccaatgtcaatgagatcaaagacccg
tttcctcccgcagacttcccaggtgatgatgaggaggaggaccctgcgatcccagaaagt
cccagacctcgcccaatggctgatctgcagctgaaagaggaagccgtccctatgccagag
gccagctctttcttcatctttggacctcagaacaagtttaggaagctctgccatcgaatc
atcaatgcaaccaccttcaccaacattatcctcctcttcatcctgctctcatctatttct
ttagcagctgaggatcctattgaccctgtgtctcccaggaaccaggtgctggcctatgct
gacatcgtcttcacatcagtgttcacagcagaaatagtgctgaagatgacaacttatgga
gccattcttcacaaaggatctttctgccggaactcctttaatattttggatctgctggtg
gtcagtgtgtcactgttgtccatgggcatggaatcgagtgccatctcagttgtgaaaatc
ctcagggtgttgagagtcctccggcccctgagggccatcaacagagcaaaaggactgaag
catgtggttcagtgtgtctttgttgctgtgaaaaccattgggaacattgtactcgtcaca
atgctgctggacttcatgtttgcttgcattggagtccaactttttagaggcaagttctac
tcctgcactgaccctgaccagatgacagaggaaacttgcaaaggttggtacatacggtac
caggaaggagcacttcatgagatggaggtccgtaaacgagaatggaccaatgcacagtta
aattttgataacatcttcaatggaatgttgtctctattcaccatttctacatttgaagga
tggccaaagattctctataaagccatcgattccaatatggaggataaagggccgatatac
aacaatagagtggccatctcaatcttcttcatcatctacctcattcttattgctttcttt
atgatgaatatatttgtgggcttcgtcatcgtcacttttcaagagcagggagagcaagag
tacaaggactgtgagctggacaaaaatcagcgtcagtgtgttcagtatgcgctaaaggcc
cgtccgctgcgctgctacatccctaagaacccgtaccagtaccaggtgtggtacattgtc
acctcctgctactttgagtacctgatgttcctcctcatcatgcttaacaccatgtgtctg
ggaatgcagcactgcaaccagtcagaccatgtgacgcacctgtccgacatgctgaacgtg
atcttcaccgtgctcttcacagtggagatgatcctgaaactcatggcattcaaagccaag
ggctactttggagatccctggaacgtctttgacttcgtcatcgtcattgggagtgttgtg
gacgtgatgctgagtgaaattgatggtgctctggcttcctctgggggactctactgtctc
cacggctgctctgaagtggaccccatgcaggcaatcgcagcatctgaaaacatgagtgtg
tcgatcaccttcttcagactgttccgtgtcatgcgtctggtgaagcttctgaataggtca
gaaggaatacgaaacctgctgtggaccttcatcaagtccctacaggcgcttccgtatgtg
gccctcctcatcctcatgctgttcttcatatatgcagtagtcgggatgcaggtgttcggg
aagatagctctgatggacggcacattcatcaacagaaacaacaacttccagacgtttccc
caggcggtgctgctgctattcaggtgtgctacaggggaggcgtggcatgaagtgatgcta
gcctgcatgtatgggaagaaatgtgacccaaaatctgacttcctgcctggagaagagaac
acctgtgggtctaactttgccatcatctacttcatgagcttttacatgctctgtgctttt
ctgattataaacttgtttgtggccgtcattatggacaactttgactacctgacacgtgat
tggtccatccttggcccgcagcacctggacgagttcaaaaagatctgggcagagtatgat
ccagaggcaacggggcgcatcaagcacctggatgtggtcactctcctgcggaggattcct
cctcctctgggatttgggaagttctgccctcatcgcatcgcttgcaagaggttggtctcc
atgaacatgcctctcaacagtgatgggacggtcaccttcaatgccactttgtttgcattg
gtcagaacggcattgaaaataaagacagaaggtaactttgaacaagcaaacgaggagctg
agaggaatcatcaagaagatctggaagcgcaccagcatgaaactgctggatcaagtcatt
ccccccattggagatgatgaggtgactgtggggaagttctacgccaccttcctcatccag
gattattacaggaaactgaagaagaggcaggaggaatactacggctatcatcccacaaag
aagagtgccacccatgaaatacaggctggactgaggaacatagcagaggaggcgcctgca
gagctgcacaggtccatttctggagacctgctggctgaggaggactctgaccacggagtg
gaggagatattcaggagacaagccagtctgtttggaaaccattcagacccgtttgctgta
gagaccgacccagcctacaccagccagcgccccctgcagatggacgaaggcttcactaac
aacatcagcatgagtcaaagtcaattctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (52)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (72)   

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