KEGG   Oryzias latipes (Japanese medaka): 101161779
Entry
101161779         CDS       T02443                                 
Name
(RefSeq) low-density lipoprotein receptor
  KO
K12473  low-density lipoprotein receptor
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ola00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101161779
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ola04131]
    101161779
Membrane trafficking [BR:ola04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Low-density lipoprotein receptor (LDLR) family proteins
    101161779
SSDB
Motif
Pfam: Ldl_recept_a Ldl_recept_b FXa_inhibition cEGF EGF_CA SGL Arylesterase EGF_3 TM_ErbB1
Other DBs
NCBI-GeneID: 101161779
NCBI-ProteinID: XP_011472600
Position
1:complement(10462572..10472650)
AA seq 849 aa
MTGTRRRLAELSCLLMLIHCLAKTDGALTCSSSQLKCGNGRCVTRRWICDGTDDCGDGTD
ELLSTCASKTCLPSQFNCGAPINQCVPKSWHCDGKADCSNGADEKNCTVKQCKNDEFRCA
NGQCISLSFVCDNDNDCSDGSDETTCSKPTCNPLSFQCNNSVCVPSLWRCDGDEDCADGS
DEWPETCGGKKPAAKCSVSEFECANGQCIPGSWRCDGGIDCDDRSDELNCSRPVCLEGQF
QCGDGSCLQGNLKCNSVRDCSDGSDETDCSTACDAPSEFKCSSGECISMENVCDKTKDCS
DGSDEPESSCGINECSTANGGCSHHCNDLKIGFNCSCPAGYKLKADQRNCEDINECAEAD
TCSQICINLPGSYKCDCEWGYKIDPVSNTCKAESGTVPALLFTTRHDVRKILVDHSEYVQ
VIPGLKNAAALDMDMAQKTLYWSDVSLKKIFRLNLADSSSKPVTVIDSGIETPEGIAVDW
VHGNIYWTDSTLKTISVASTDGTKRKTLIRENLDKPRAITIDPVNNFVYWTDWGHHAKIE
KSGLNGAGRVALVTENIVSPNGITLDMVNQRLYWVDSKLHTVFSIDVNGGTRHRVVVINQ
RPSHPFSLTVFEDKVFWTDTGLRGIYSASRLTGRNLTQIAGDLDHPEDIILYHNLKQPIG
INWCNSGKDSCEFLCLPAPQANTTSPKYSCACPDDMSLGPDMRSCVTGSADKNRNPLPSV
TPTKPVPVDKTTTTTVANKGPASTSSVRSTQVPSANAQGNRQFVTPTEAPTSYSSTLVVV
LSIMLVSLLAMGALFLWRRWRVKNTNSIHFDNPVYQKTTEDEVHICRNGSDGFVYPPKQV
VYTDEMDLA
NT seq 2550 nt   +upstreamnt  +downstreamnt
atgactggcacgcggaggagactcgccgaactgtcatgtctgctgatgctgattcactgc
ttggcgaagacggacggcgcgctcacatgcagctcttctcagctgaagtgtgggaacggg
aggtgcgtcactcgcaggtggatctgcgatggaacagatgattgtggcgatgggacggat
gagctcctctccacttgtgcctctaaaacctgcctgccgtcacagtttaactgcggcgcc
ccaatcaaccagtgtgtccctaaaagctggcactgcgatggcaaagctgactgtagcaac
ggagcggatgagaaaaactgcaccgtgaaacaatgcaaaaacgacgagtttcgctgcgca
aacggccagtgcatatccctcagtttcgtctgcgacaacgacaacgactgctcagatggt
tccgacgagacgacctgttccaagcccacttgtaaccctctgtctttccaatgcaacaac
tctgtgtgcgtgccttccctgtggcgctgtgacggggacgaggactgtgccgatggatct
gacgagtggccggagacctgcggcgggaaaaaaccagcagctaaatgcagcgtcagcgag
tttgagtgcgcgaatgggcagtgcatccctggcagctggaggtgcgacggaggcattgac
tgcgatgatcggtccgatgagctcaactgcagtcgccctgtttgtctggaaggccagttc
cagtgtggtgatggttcttgcctgcagggcaacctcaagtgtaactcggtacgcgactgc
agtgatggcagtgatgagactgactgctccacagcatgtgatgctccatcggagttcaag
tgtagcagtggggagtgcatcagcatggaaaacgtgtgtgacaagacaaaagactgcagt
gacggatctgatgagcctgaaagctcatgtggcatcaatgagtgttcaacggcaaacggc
ggctgctctcaccactgcaatgacctgaagatcggcttcaactgctcctgccccgctggt
tacaaactaaaagcagaccagagaaactgtgaagacattaatgaatgtgctgaagccgac
acatgcagccaaatttgcatcaacctgcctggcagctacaagtgtgattgcgagtggggc
tacaagattgaccctgtgagcaacacatgcaaagctgaatcaggaactgtgcccgccctg
ctcttcaccaccaggcacgatgtgaggaagatcttagtggaccatagcgagtatgtccag
gtcatccctggcctgaaaaacgctgcggctctggacatggacatggctcagaagaccctc
tactggtctgacgtgtctctgaagaagatattcaggttaaacttggctgacagctcctcc
aagcctgtcacagtcattgacagtgggattgagaccccagagggtattgccgtagattgg
gtccacggcaacatctactggactgacagcactttgaagacgatctctgtggcgagcact
gatggcaccaagaggaaaacccttattagagagaacctggataaaccaagagccatcacc
atagacccagtcaataacttcgtgtactggacagactggggacatcacgccaaaatcgag
aagagtggtctaaatggagccggtcgtgttgccttggtaacagaaaacattgtgtcgccc
aatggcatcactcttgacatggtcaaccagcgtctgtactgggtggactccaaactgcac
acggtcttcagcattgatgtgaatggaggaaccagacacagggtcgttgttatcaaccaa
aggccctctcatcctttttcactgaccgtctttgaggacaaagtgttttggacggacact
ggtttgcggggcatttacagcgccagtcgtctcacaggaagaaacctcacccagattgct
ggagacctggatcatccagaggacatcatcctttaccacaacctcaagcagcccatcggc
atcaactggtgcaacagtgggaaagacagctgtgagtttctgtgtctccctgctcctcaa
gccaacacaacctcccctaaatacagctgtgcctgtcctgacgacatgagcctgggtccc
gacatgaggtcatgtgtgacaggctcagcagacaaaaacagaaatccactcccatctgtg
acccccaccaagcccgtcccagttgacaagactacaaccaccaccgtcgctaataaagga
cctgcatctacctcatctgtgcggagcacacaggtgccgtccgccaatgcccaaggtaac
agacagtttgtgactcctacggaggcccctacatcgtactcttctactctcgtcgtcgtt
ttgtctatcatgctcgtgtccctgctggccatgggagctttgtttctgtggaggcgctgg
cgtgtgaagaacaccaacagcatccacttcgacaaccccgtgtaccagaaaaccacagag
gacgaggtgcacatctgcaggaacggctctgacggctttgtttatcctccgaaacaagtg
gtatacacggacgaaatggatttggcataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (80)   
   KEGG ORTHOLOGY (1)   
   RefGene (76)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (95)   

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