KEGG   Oryzias latipes (Japanese medaka): 101163380Help
Entry
101163380         CDS       T02443                                 

Gene name
hdac6
Definition
(RefSeq) histone deacetylase 6 isoform X1
  KO
K11407  
histone deacetylase 6 [EC:3.5.1.98]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
Enzymes [BR:ola01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     101163380 (hdac6)
Protein phosphatases and associated proteins [BR:ola01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101163380 (hdac6)
Messenger RNA biogenesis [BR:ola03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     101163380 (hdac6)
Chromosome [BR:ola03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     101163380 (hdac6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
Position
Unknown
AA seq 1073 aa AA seqDB search
MQPGSEPPRSGSKSVRRSPRLSSQDSKDGIEERRRGSNLQEVKRRGRIERSYQKDEELSS
IMGALGLSGRSAARGTGLVYSEIFTRHQNLWEPSHPESPDRVRSIMEELERQQLLPCCVS
VQPRAATEEELLLVHTKDYIDLVKSTETMTQSELQTLCCKYDSVYLHPLSFKVCAIAAGS
VLQLVDEVMAFNLRNGFAVIRPPGHHAQTSEPNGFCVFNNVAIAARYACSRHAVSRVLIV
DWDVHHGQGLQYLFQEDPSILYFSIHRYEHASFWPHLPESDSSFVGSGHAIGRNINLPWN
KIGMSDADYISAFQHVLLPVAYEFQPQLVLVSAGFDAAAGDPKGEMNVSPQCFHTLTHML
MSLAEGRLVLVLEGGYNLKATAEGAAACVRALLGRACPPLNPPTGPSESAMHSISQTISA
LYVHWAFLQVLEGTSSAEADSTKTVSGHTSTTTVAPALAAATITGLVYDERMMEHVNLWD
RHHPEQPQRIFKIFSRHQQLGLVDRCQLIQSRLATEEELAMCHSLQHIQQMSATATMKPR
DLHRLGDEFVSIFISNQSFQSAQLAAGSCFAAVEHMLNGQVNNAVAIVRPPGHHAEMDFP
CGFCLFNTTALTARHAQKVSHDLQILILDWDVHHGNGTQHIFEDDNSVLYISLHRYDNGA
FFPSSKDGAPENVGVAKGAGYNVNLAWSGGRMGDSDYLAAFHQVVMPIATEFNPGLVLVS
AGFDAAQGDPLGGYHVTPEGYAHFTHMLMSLAGGRVLFILEGGYNLKSISDSMAACTSVL
LGDPPPSLATPLPPPHHCAAVAINKVIQHHAPYWKSLRVQIPESVRAFLPSPKHRGKHGP
KGRVRKSEQNSMGRLESSIVQSGLEQLMQGLAGLDISQSPANQSLSAVSLSVRSESDPHS
DTVEEMRVLKGDSQSRIALPQTVAEVTPEMAIPKDKPQLEGACGWAGCQKDTGLMCAEET
SLYVVDPLPWCSHLGSVKPLPPSGIDVSRPCQDCGSEAENWICLTCYQVFCGRYVNEHMV
AHGKEVEHPMVLSFSDLSVWCYMCESYIHHQVLFQAKNAAHFSKFGEESPPWK
NT seq 3222 nt NT seq  +upstreamnt  +downstreamnt
atgcagcctgggtcagaacctccacgatctggatccaagtcggtcagaaggtctccacgt
ctgtcatcgcaggacagcaaagatggaatagaggaaagaagaagaggaagcaatctgcaa
gaagtgaagaggagaggaagaattgagagaagctatcagaaggacgaggagctaagtagt
atcatgggggcactgggtctttccggcagatctgcagccagaggaaccggtctggtttac
tcggagatctttactcggcaccaaaacctgtgggagcccagtcatccagagagtccagac
agagtcaggtccatcatggaggagctggagcggcagcagctgctgccttgctgcgtcagt
gttcagcctcgggcagctacagaggaggagctgctgctcgtacacacgaaggattatata
gacctggtcaagtccacagagaccatgacacagtctgagctgcagaccctttgttgcaaa
tacgactctgtctatctgcatcctctgtccttcaaggtatgtgcaatagcagccggttct
gtcctgcagctggttgatgaggtcatggcctttaatctcaggaatggatttgctgtcatc
aggcccccaggtcatcacgctcagaccagcgagcccaacggtttctgtgtgttcaacaat
gtggcaattgcagctcgctacgcctgcagccgtcacgccgtcagcagggttttaattgtg
gactgggatgttcaccatgggcagggtcttcagtaccttttccaggaggatcccagtatc
ttgtacttcagcattcataggtacgaacacgcctccttctggcctcacctgccagagtcc
gacagcagctttgttggaagtggacatgctataggcagaaacattaaccttccctggaac
aagattgggatgagcgacgctgattacatctctgctttccagcatgtactgctgcctgta
gcctatgagtttcagccccagctggttctggtctctgctggatttgatgctgcagctgga
gatcctaagggggaaatgaatgtgagtcctcagtgctttcacacactgacacacatgctg
atgagtctggctgaaggtcgactggttctcgttctagagggaggttacaacctgaaggcg
acagcagaaggcgctgcagcctgtgtccgagctttgctgggtagagcctgccctcctttg
aatccccccactggaccctctgaaagcgccatgcattctatctctcaaaccatctctgca
ctgtacgttcactgggccttcctccaagttttggagggaacttcctccgctgaggctgac
tcaaccaagacagtttcaggtcacacaagcacaacaactgtggcccctgcccttgctgct
gccactatcacaggcttggtctatgatgagagaatgatggagcacgtaaatttgtgggac
agacaccacccagagcagccgcaaaggatcttcaagatattctctaggcaccagcagctg
ggattagtcgaccgctgccagctaatacagagtcgcttggcaacagaggaggagctggct
atgtgtcacagtttgcagcatatccaacagatgagtgcaacggcaaccatgaagcccaga
gaccttcacaggctgggggatgagtttgtctccatcttcatcagcaatcagagcttccag
tccgcccagctagctgctggaagctgctttgctgctgtggagcatatgttaaacggacag
gtaaataatgccgtggccatcgtccgtcctccaggccatcacgctgagatggactttccc
tgcggcttttgcctcttcaacacaacagcactcactgctcgccatgcacagaaagtctcc
catgatctacaaatcttgattctggactgggatgttcatcacgggaacgggacgcagcac
atatttgaggacgataacagtgttctttatatctccctccaccgctatgacaatggggct
ttctttccgtcatcaaaagacggtgcccctgaaaatgtgggtgtggccaaaggtgccggg
tataatgtaaatttggcgtggagtggagggcgaatgggggactctgactacctggcagcg
tttcaccaagttgtcatgccaatcgcaacagagtttaaccccggcctggttctggtgtcc
gccgggtttgatgcagctcagggggatccacttggtggatatcacgtgactccagaagga
tacgctcacttcacgcacatgctgatgtcacttgctggagggcgggtcctattcatcctg
gagggaggctacaacctcaaatccatttctgactccatggctgcctgcaccagtgtgctg
ctgggagaccctcccccatcactggcgacccccctccccccccctcaccactgcgctgca
gtagccatcaacaaggtcatccagcaccatgccccctactggaagagcctgagggttcag
attccagagtcagtgcgagcattcctgccatccccaaagcatcgtgggaaacatggtcct
aaaggaagagtcaggaagtcggagcagaacagcatgggcagacttgagtcctctatagtg
cagagtggcctggagcagctcatgcagggattggccggtctggacatcagtcaaagccca
gcaaatcagtcactttctgccgtctccctctcagtcagatctgagtccgacccacattca
gatacggttgaagaaatgcgggtgctaaaaggtgacagccagtcaaggatagcactacct
cagactgttgctgaggtaacacctgagatggccataccaaaagacaagccacagctggaa
ggagcgtgtggttgggcggggtgtcagaaagacacaggactgatgtgtgcagaagagaca
tctctgtatgtggttgatccactgccctggtgctcccacctgggttctgtaaagcccctc
cctccctcaggtatagacgtgtcacggccctgccaggactgtggatctgaggcagagaac
tggatttgcctcacgtgctaccaggttttctgtgggcgctacgtgaacgagcacatggtg
gctcacggcaaagaggtggagcaccccatggttctgagcttctctgatctttctgtgtgg
tgttacatgtgtgagtcctacatccaccaccaggttctgttccaggccaaaaacgctgcc
cacttctccaagtttggagaagaaagccctccatggaaatga

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