KEGG   Oryzias latipes (Japanese medaka): 101164689
Entry
101164689         CDS       T02443                                 
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101164689 (wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ola03009]
    101164689 (wdr43)
Ribosome biogenesis [BR:ola03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    101164689 (wdr43)
SSDB
Motif
Pfam: Utp12 WD40 ANAPC4_WD40 NBCH_WD40 Paf1 WD40_2 WDR54 SGL
Other DBs
NCBI-GeneID: 101164689
NCBI-ProteinID: XP_004082853
UniProt: H2MVK5
Position
22:27245371..27266648
AA seq 646 aa
MASDGGSSSLQLPCVFSPKSRQYLAVCAQDGRLRIWNTDSKTIHQEYVPSAHLSATCTCI
AWGPCRTVKEGPQRKKRKSEAVQVEEKADLLAMGTAAGSVLLYSTAKGSLHCSLDEAHSA
GVNCVHWHPEDSVLYSGSDDTNIVEWDLQSGKMRSKWKADRAAVTSLCVSPDGKLLLSAG
HVIKMWDLDTKELYRKFTGHSTAVTTLRFATTRPPDSNGLYFVSGAAHDRLISVWQVRED
GKDKNSVVSFTLTDEPRHVDLVPSNSKEEAVRLAVVCQDGQLHLFEHFLNGPCKKPFLPS
CSVQMADTRESPMPIPMLAAVLGRDSRSVLLAYGNHLQPVIEQVEVNTTERHVCLSRDVK
TSLSLTMESTVSKVKTPVVNTKSKVLVPGLPGHQAPLKGSHLEKASEKRKKDTKEMSIAE
QLGEIDLSATSSEKVKASLQTDNYAVLLVQGLESNDADILNKVLQTRKEMVIKKTVARLP
LSAVLPLVKELTNRLQGHPFAGILMVRWLKAVLMHHTSYLASLPDLVTELGVLYHMIESR
VKMFHKLTKLHGKLYLLMTHVAASDSSNMVSEVDHTAKLVYEDESSDENEASGDEVLPED
DSDHWEEEEGMEEDQQSSEEEDEGNRTEPKANGEEDMEHENESEEE
NT seq 1941 nt   +upstreamnt  +downstreamnt
atggcgtctgacggtggcagctcatcgctgcagctaccctgcgttttctcacccaaatca
cgccagtatttggctgtgtgcgctcaggatgggagacttcgaatctggaatacagacagc
aaaactattcaccaagaatacgtgccttcagctcatttgagtgccacttgcacgtgcatc
gcctggggaccatgccgaacagtgaaggagggacctcagaggaagaagaggaaatcggag
gcggtgcaggtggaggagaaggccgacctgttggcgatgggcacagcggctggcagcgtc
ctcctctacagcactgctaagggaagcctccactgttccctggatgaagctcacagtgca
ggagtgaactgtgtccactggcaccctgaagacagcgtgttgtacagcggctcagacgac
acaaacattgtggaatgggacctgcagtcaggaaagatgaggagtaagtggaaggcggac
cgcgccgcagtgaccagcctgtgtgtcagtcctgacggcaaactgctgctttcagcggga
catgtgatcaagatgtgggacctggacaccaaggagctctacagaaaattcacaggacat
tcaacggctgtgacgaccctgcgctttgccaccactcgaccccccgacagcaacgggctg
tactttgtgtccggcgctgcacacgaccggctgatcagtgtttggcaagtacgagaagat
gggaaggacaagaactcggtggtgtcgttcacactcactgatgagccgagacacgttgac
ctcgtcccatccaacagcaaggaagaggcggtaaggctggcagtggtgtgtcaggatggg
cagctgcatttgtttgagcactttttaaatggaccctgtaagaagccctttttgccctcg
tgttcggtgcaaatggcagacaccagggagtcaccgatgcccatccccatgctggctgct
gtgctcggaagggattcccggtccgtgctgctggcctacggaaaccacctgcagcccgtc
atagagcaagtggaggtcaacaccacagagagacacgtgtgtttgagtcgagacgtgaag
accagcttgtctctcaccatggagagcaccgtctcaaaggtgaaaaccccggttgttaac
acaaagagcaaagtactggtgcctggacttcctggtcaccaagctccattaaaaggatcc
catcttgaaaaggcatcagagaaaagaaaaaaggacaccaaagagatgtcaatagctgag
cagcttggcgagatcgatctatcagccacatccagcgagaaggtgaaggcgtctttacag
acggacaattatgcggtgctgttggtgcaaggtctggagagcaacgacgccgacatccta
aataaagttttacagactcgtaaagagatggtgataaagaagacggttgctcggttaccg
ctctctgctgttcttccgttggttaaagagctcacaaatagacttcaaggacatcctttt
gcgggaattctgatggttcggtggctgaaggctgtcctcatgcaccacacgtcgtacctg
gcatctctgccggacctggtcactgagctgggagtcctttatcacatgatcgagagcaga
gtaaaaatgttccacaaactcacaaaacttcacgggaaactttacctgctgatgacgcat
gtggcggccagtgacagcagcaacatggtctcagaggtcgaccacacagcaaagctggtg
tatgaagacgagtcatcagatgaaaatgaagcttctggtgatgaagttcttcctgaggat
gactctgatcactgggaagaagaggagggcatggaagaagaccagcaaagttcagaggaa
gaggatgagggcaacagaacagaacccaaagcaaacggagaagaagacatggagcatgaa
aatgagagtgaagaagaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (29)   

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