KEGG   Oryzias latipes (Japanese medaka): 101167066
Entry
101167066         CDS       T02443                                 
Symbol
c1d
Name
(RefSeq) nuclear nucleic acid-binding protein C1D
  KO
K12592  exosome complex protein LRP1
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101167066 (c1d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ola03019]
    101167066 (c1d)
Messenger RNA biogenesis [BR:ola03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     101167066 (c1d)
SSDB
Motif
Pfam: Sas10_Utp3 DUF932 FidL_like
Other DBs
NCBI-GeneID: 101167066
NCBI-ProteinID: XP_004077040
Position
15:11214469..11216233
AA seq 154 aa
MASTEEEYPYEIDEQLRSFDSSVTAVKSMLDKLMSMSRNELLVKLDPLDQAKLDLMSAYT
LNSLFWVYLVTRGINPREHGIKQELERIRAYMNRVKEITDKKKAARLDKGAASRFIRSAL
YEPDDKDSGKKNESKKQADSTAAEPPPKRQKQRK
NT seq 465 nt   +upstreamnt  +downstreamnt
atggcgtctacggaggaggaatacccgtatgagatcgacgagcagctgcggagcttcgac
tcctccgtgactgcggtgaaatccatgttggacaaactgatgtcgatgtccagaaacgag
ctgctcgtgaagctggatcctttggaccaggccaaactggacctgatgtctgcgtacacc
ctaaactcgttgttctgggtgtatttggtgactcgaggaataaaccccagagaacacggc
atcaaacaggaactggagcgaatccgggcgtacatgaaccgagtcaaggagattacagac
aagaagaaggcggcgcgcctggataagggcgccgcctcccgcttcatcaggagcgccctt
tacgagccggacgacaaagactccgggaaaaagaacgagtctaaaaaacaagcagattcc
acagccgcagagccgcctccaaaacgacagaaacagaggaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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