KEGG   Oryzias latipes (Japanese medaka): 101167576
Entry
101167576         CDS       T02443                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
  KO
K08601  ubiquitin carboxyl-terminal hydrolase CYLD [EC:3.4.19.12]
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04217  Necroptosis
ola04622  RIG-I-like receptor signaling pathway
ola04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ola00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    101167576
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    101167576
   04625 C-type lectin receptor signaling pathway
    101167576
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ola01002]
    101167576
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    101167576
Enzymes [BR:ola01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     101167576
Peptidases and inhibitors [BR:ola01002]
 Cysteine peptidases
  Family C67
   101167576
Ubiquitin system [BR:ola04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    101167576
SSDB
Motif
Pfam: CAP_GLY UCH
Other DBs
NCBI-GeneID: 101167576
NCBI-ProteinID: XP_004080024
UniProt: A0A3B3HLI4
Position
18:complement(21397052..21419081)
AA seq 943 aa
MSGAHEQERKRRPSKTFLISADLRVHDAMEGSILLKRGSFCLEQDLAKSKTDQAWVKVVE
NDIVLKVEKKYLVELHQGLAGLLEPVVDLETRVNLMYEPNKLQQLASLPVNTPLWVNVGQ
HGELAEAELRYVGPLSRGSNAVYFGVELKGSAVGKGTTNGTHRGHRLFTCPDACGLFVPI
SHVHPRTWSRSNVLEAQARAQERNHHRSNGRAAPPQNRRSLHKARSAHPQHIIPGPAEPP
STLAQNQVQGPFQVGQRVSVHQDENVCAGEVRFCGALPGRSSSEFHVGVLLDAPVGNWDG
TYRGEKLCHIPSKLYGLLLPASAISPEQNGHQKPPQPKPLMKQPLPPATKPASTTFPAVA
PKVALLPPTKQGVKPPPLPPPKATQKVLPTPPVPPPKPPNLASDLEKLQPSNGVHGPPSP
LTLSDDAESSKEDEEEEPRSDLEVGSMVEVNDPPLYGVIRWIGRISGVPETVAGIELDQE
LSAGTDGSYLGERRFRCPANKGLFVKLRNCRRDSRFPAPETPVNQVERCNSIAFAEWGSK
RVEEHTPPVDGDEARELYQGWKKGIQGHLNSCYLDATLFSLFSCCSSADWLLFWPSDPEE
HRSAVQAQDQLRCEIVNPLRRNGYVCASKTMALRRMLEAANNDASFTSQEKDPEEFLNKL
FQLLRVEPLLKIRSMSLDPQECHLYQLFPPTHPPSPSSPTSPVESPIPLSLPPSLRVASV
QNLLETSFMHTGLKFVEAPSCLLLLMPRFGKDFKMFDAILPTLSLDITDLLDDTLRQCSI
CQSVAEWECLQCYEDPDITPGHLKQYCQTCNTQVHSHRNRLSHSPVKIGIPEGPWSGPLI
CTRRKMSLFAVTCIETSHYVSFVKHGPQPTDWLFFDSMADREGGQNGFNIPQVKACPEVG
RYLSLSEEELSRVDPASLRETVRRLLCDSYMCLYHSPELSLYR
NT seq 2832 nt   +upstreamnt  +downstreamnt
atgtccggagctcacgaacaggagaggaagcggcgcccctctaaaacatttttgatctct
gccgaccttcgcgtccatgatgccatggaaggttccattctgctgaagcgggggtcattt
tgcctggagcaagatttggccaaaagcaagacggaccaggcctgggtgaaggtggtggag
aatgacatcgtgctaaaagtagagaaaaaatacctggttgagttacaccagggcctcgct
ggcctgctggagcctgtggtggatttggaaactcgtgtgaacctcatgtatgaacccaac
aagctgcagcaactggcatctctgccggtcaacactccgctctgggtcaatgtgggccag
catggtgagctggcagaggcggagcttaggtatgtgggacccctgagcagaggcagcaac
gctgtgtactttggggtagagctgaagggttcagcagtgggcaaaggtaccaccaacggc
acccacaggggccaccgcctcttcacctgccccgacgcctgcggcctcttcgtcccaatc
agccatgtccatccccgcacctggtcccgctccaatgtcttagaagcacaagcgcgagct
caagagcgaaaccaccaccgcagcaacgggcgtgccgctccgccacaaaaccgccgcagc
ctccacaaggctcgctctgcacatcctcaacacatcatcccaggtccggcagagccaccc
tccaccctggctcagaaccaggttcagggcccattccaggttggacagcgagtgagcgtc
catcaggatgaaaacgtctgtgctggggaggtgcgcttctgtggggccctacctggacgc
tcctcttctgaatttcacgttggagttcttctggacgctcctgttgggaattgggacggg
acttacaggggggagaagctctgccacattccctccaagctctacggactcctgctgcca
gccagtgccatttccccggagcaaaacggccatcagaaacctcctcagcctaaacccctt
atgaagcagcctctgcctcctgccaccaagccagcctccacaacattccctgctgttgct
cccaaggtcgccctcttgccccccaccaaacagggagtcaaaccaccccccttacctcca
ccaaaagccacacagaaagtactgcccactcctccggtccctcccccaaaacccccaaac
ctggcatctgatttggaaaagctgcagccctccaacggcgtgcacggccctccttcaccg
ctgaccctttcagacgatgcagagagctcaaaggaggatgaggaggaggagccaaggagc
gacctggaggtgggctcgatggtggaagtgaatgacccgcccctgtacggggtcatccgc
tggataggacggatcagcggcgtccctgaaacggtggctgggatcgagctggaccaggag
ctttctgctggaacagacggcagctacctcggggagcgacgctttcgttgccctgccaac
aagggtctgtttgtgaagcttcgtaactgtaggcgggattccagattccccgcccctgaa
acgcctgtcaatcaggtggaacgatgcaactccatagcctttgcagagtgggggagcaaa
cgcgtggaggagcacactcctcctgtggatggagatgaggccagggagctctaccaaggc
tggaagaaaggcatccaggggcacctgaactcctgctacctggatgctaccctgttcagc
ctgttctcctgctgcagctcggctgactggctgctgttttggccgtctgaccctgaggaa
caccgcagcgccgttcaggctcaggaccagctgcgctgcgagatcgtcaacccgcttcga
aggaacggttatgtgtgtgccagtaagaccatggctctgagacgcatgctggaggctgcc
aacaatgacgccagcttcaccagtcaggagaaagatccagaggagttcctgaacaagcta
ttccagctcctgagagtggagccgctcctcaagatcaggtcgatgagtcttgaccctcag
gagtgccacctgtaccagcttttcccgccaacacacccaccgtctccgtcctctcccacc
tcccccgttgaatcccccatccctctgtcgttgcccccgtccttgagggtggccagcgtc
cagaacctgctagaaacctctttcatgcacaccgggctcaagtttgttgaggccccctcc
tgtctcctgctgcttatgccaaggtttggcaaggacttcaaaatgtttgacgccatcttg
cccacgctcagtctggacatcactgacctcctggatgacactctgcggcagtgcagcatc
tgtcagagtgtggcggagtgggagtgcctgcagtgctacgaggacccagacatcactcct
ggacatctgaagcagtactgccaaacctgcaacactcaggttcacagccacaggaaccgg
ctgtcccacagccccgtgaagatcgggatccctgaaggcccgtggtcaggccctcttatc
tgcacccgccgcaaaatgtctcttttcgccgtgacgtgcatcgagaccagccactacgtg
agcttcgtcaagcacggcccccagcccaccgactggctgttcttcgacagcatggctgac
cgagaaggtggacagaatggcttcaatatcccccaagtcaaggcgtgtcccgaggttggc
cgctacctcagtctctcagaggaggagctgagcagagtggaccccgcctccttgcgggag
acggtccgccgcctactctgtgactcatacatgtgtctgtaccacagccctgaactcagc
ctgtaccggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (53)   

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