KEGG   Oryzias latipes (Japanese medaka): 101172910
Entry
101172910         CDS       T02443                                 
Name
(RefSeq) integrin alpha-6
  KO
K06485  integrin alpha 6
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04510  Focal adhesion
ola04512  ECM-receptor interaction
ola04514  Cell adhesion molecules
ola04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:ola00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101172910
   04514 Cell adhesion molecules
    101172910
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101172910
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    101172910
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ola04147]
    101172910
   04515 Cell adhesion molecules [BR:ola04515]
    101172910
   04090 CD molecules [BR:ola04090]
    101172910
Exosome [BR:ola04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101172910
  Exosomal proteins of breast milk
   101172910
Cell adhesion molecules [BR:ola04515]
 Integrins
  Integrin alpha subunits
   101172910
CD molecules [BR:ola04090]
 Proteins
  101172910
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 MFS_Mycoplasma DUF11 TMEM52
Other DBs
NCBI-GeneID: 101172910
NCBI-ProteinID: XP_011478159
Position
10:6563018..6584015
AA seq 1052 aa
MGTLFLMHNMLKLCLMVTLWIILHFQLFNVAAFNLDTENVMQKKGDPGTLFGFSVAFHEQ
LSPARKKLLLVGAPRAKHQDHVNVTGVVYMCDLSTASEHCQPIKFDHKEFLSSKGTNNQW
MGIKVTSQGVGKNVMACAHRYQHPSPYSPNLLTGQCYLLGDHLQVGTEERTWRRVVCDNE
HLANRRNNHEWFAYCQQGHGASFAKDNTSVLFGAPGAYQWKGIVRMEPLDNLDYTNENSR
ETGFIDRFDQEVIPLQANSYLGFSVDSGMSLVRRGELTIVSGAPRGGFSGQVAFLKADPE
VKTNLLVEHVLSGPGLASSFGYDLAVVDLNADGWEDLAVGAPQFYMKNEDVGGAVFIYIN
RNGKHWDNIVPVPLHGERESMFGLAVENLGDLNQDGYGDIAVGAPYEGSGRVYIYCGSAE
GVHKKASQVISPALKTVNLFGYSLSCNMDIDNNQYPDLAVGSLSDSVFVFRARPVVSVRT
DMKIKPNHVNIIKQRCDEQTCAFAGQACFAYTAQPASYNAKLTLNYIFEADSERRTSRSR
VEFLFSSQGKLELPEKGKQMCTDIKLRLLRDIRDKLSSIPVSVTVSLWNSEEMTRMSADE
SRIPPVLNLYQQKTTVSEIIIINDGCGDDNICNSNLQIQYKFCSKKTQNGEVVFTLLVRQ
DGIAVITPTDEDIALEITVTNRHGDDAHQSHVIITLPDTLRYSSVVHRGKELSCSANENG
TLIDCELGNPFHRDAELTYYVILTTSGISLSTRDVNATLQLQTTSVQNLQPVEVLARVVF
ELELKINGVVRPSQVSLGDILKGESAIHSLEEIGASVQFDFKIINLGRPLKYFSNASLNV
YWPKETSVGKWLLYLTHISTEGVRSVPCSPANEINPLKDVKGWNAASRRKRDTKLEALSS
EGLTFLPKKRKFKTLSCSDGLTCVEIRCPLVELDSTAMVVLHSHLWNATLAEDYSHLHFL
DIVVDVTLSLNNAPGNIGLKSETNVTQVKLTVFFERKTEFLTKVAWWIILLTVVTLLLLL
CFLGYILWKYKCIHHLTHKKKPSEDPAEHLKG
NT seq 3159 nt   +upstreamnt  +downstreamnt
atgggaaccctctttctaatgcacaatatgttaaagctttgcctcatggtgactctgtgg
attattttgcactttcaacttttcaatgttgcggcttttaacctggacacagaaaatgtc
atgcagaaaaaaggagatccggggacactttttggattttctgttgcctttcacgagcag
ctgagtcctgccagaaagaaactattgcttgtgggagccccacgtgcgaaacaccaagat
cacgtgaatgttacaggagttgtttacatgtgtgacttgagcacagcatctgagcactgt
cagcccatcaagtttgaccacaaagagttcctcagtagtaaaggaacaaataaccaatgg
atgggaattaaagtcacaagccaaggtgttggtaaaaatgtaatggcatgcgctcatcga
tatcagcatccaagcccttacagccctaacctgctgacgggtcagtgctacctcctagga
gaccacctgcaggtcggcactgaggagagaacgtggcggagggtggtttgtgataatgaa
cacttggccaatcgacggaacaaccacgagtggttcgcttactgccaacagggacacgga
gcatcgtttgccaaggataacacttctgtgctttttggagcaccaggagcttatcagtgg
aaaggaattgtgcgcatggaacccttggataacttggactacaccaatgaaaattctcga
gaaactggatttatagatcgctttgatcaggaagtcattcctctccaggcaaacagctat
ctgggattctctgtggactctggaatgtctttagtcaggagaggagagctgacgattgtg
tcaggagccccccgaggaggcttcagcggccaggtggccttcctgaaggcagatcctgag
gttaagacaaacttgctggttgaacatgttctctctggaccaggcctggcctcctccttt
ggctacgatttagcagttgtcgatctcaacgctgatgggtgggaagacctcgctgttgga
gcccctcagttctatatgaaaaatgaggatgttggaggagccgtcttcatctatattaac
aggaacgggaaacactgggataatatcgttccagtgccactccatggagaaagggaatcc
atgtttggtctggcagtggaaaacttaggagaccttaatcaagatggttatggagatatt
gctgttggagctccatatgaaggctccggtcgagtgtacatttactgtggctcagcagag
ggggtccacaaaaaagcatcccaggtaatctcacctgcattaaaaacagtgaatctcttt
ggatattctctctcttgtaacatggacatagacaacaaccagtaccctgatctggcagtt
ggatcactctcagactctgtttttgttttcagggcacgaccagtcgtcagtgtcagaacg
gatatgaaaataaagcctaatcatgtaaacatcataaagcaacggtgtgatgaacagaca
tgcgcttttgcaggtcaggcatgctttgcttatacagcacaaccagcatcctataatgca
aaactgacacttaactacatttttgaagctgattcagaaagaaggacgtcaagatcaaga
gtggagtttctgttttcctctcaaggaaaactggagcttcctgaaaaaggaaaacaaatg
tgtactgacatcaagctccgacttttgcgggacattagagacaagctgagcagcatccct
gtctctgtcaccgtgtccctatggaactctgaagaaatgaccaggatgagtgctgatgag
tccagaatccctcctgtcctcaatctttaccagcagaaaaccactgtgtcagagattata
atcataaatgacggctgtggcgatgacaatatctgcaatagtaacttacagattcagtac
aaattctgttccaagaagactcaaaatggagaagttgttttcacactattagtccgacag
gatggcattgcagtcatcactcctactgatgaagacatagctttggagatcactgtgact
aacagacatggtgacgatgcacatcagagtcacgtcatcattactcttccagatactctg
aggtactcgtctgttgtccacagaggaaaagagctgagctgctcagccaatgagaacggg
acactgatagactgtgagctgggaaatccgttccacagagatgctgaactcacatattat
gtcatactgacaacttctggcatctcgttgagcacaagggacgtgaacgccaccctgcag
cttcaaacgacaagtgtgcagaatctacagccagttgaggttttagccagagtggttttt
gagttggagctgaaaattaatggagtcgtcagaccttctcaagtttctcttggtgacatt
ttgaagggcgagagtgctatccactcactggaggaaataggagcatcagttcagtttgat
tttaagataataaatttaggcagacccctgaagtatttttcaaacgcgtctctgaacgtc
tactggccaaaggagacctctgtcgggaaatggctcctgtacttgactcacatcagcact
gaaggtgttcgatctgtgccctgttcacctgcaaatgaaatcaacccactgaaagacgta
aagggttggaatgctgcatcaaggcgaaaacgtgacaccaagctagaagctctgtctagt
gaggggttaacatttcttcccaagaagagaaagtttaaaaccttaagttgttctgacgga
ctgacgtgtgtggagatacggtgccccctggtggaactggacagtactgctatggtggtt
ctccattcacatctctggaacgcaactttggctgaggattacagccatttacatttcctt
gacattgtagtggatgtcactctcagcctcaacaacgctccaggaaatatcggattgaaa
tcagaaacaaatgtaactcaggttaagctgaccgtattctttgaaagaaaaactgaattt
ctgaccaaagttgcgtggtggataatcctcctgacagtcgtcactttgctgctgctgttg
tgctttcttggctacatcctgtggaagtataaatgtattcaccacctcactcacaagaag
aagccatcggaggatccagctgaacaccttaaaggttga

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