KEGG   Oryzias latipes (Japanese medaka): 105356810
Entry
105356810         CDS       T02443                                 
Symbol
sh3rf3
Name
(RefSeq) SH3 domain-containing RING finger protein 3 isoform X1
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ola01009]
    105356810 (sh3rf3)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    105356810 (sh3rf3)
Enzymes [BR:ola01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105356810 (sh3rf3)
Protein phosphatases and associated proteins [BR:ola01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     105356810 (sh3rf3)
Ubiquitin system [BR:ola04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105356810 (sh3rf3)
SSDB
Motif
Pfam: SH3_9 SH3_1 SH3_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_2 zf-RING_5 zf-C3HC4_3 zf-RING_4 zf-C3HC4_4 zf-RING_11 zf-rbx1 zf-RING_10
Other DBs
NCBI-GeneID: 105356810
NCBI-ProteinID: XP_023806987
Position
21:18062287..18170954
AA seq 845 aa
MLTLSTDMDDSSSLLDLLECSVCLERLDTTAKVLPCQHTFCRRCLENIVSSRSELRCPEC
RILVDCGVDDLPANILLVRLLDGIKQRPQRGGSGGGGGAGAGGTGRQSLPGGSLQGYAAG
ISASPPGTAVRELPVATRSSPVKNIPALPCGKALYSYEGKEPGDLQFSKGDIIILRRKVD
DNWYHGELNGCHGFLPASYIQLIRPLSQTPPQGKALYDFEVKDKDQDKDCLAFSKDEVLT
VIRRVDENWAEGMLGDKIGIFPILYVELNETAKQLMEIDKPMPANAPGTSSEPALLGSCS
LGSSPVASPPNGNGSGHRRGEGKKNAKKRHSFSALSVSQRTTQLNNRHSMEISHPVLISS
SDPRAAARIQDAPTPGPSLSSAGLPLPPKVASLTSELLAHAKVQLPLNIYLALYAYKPQK
ADELELRKGEMYRVTEKCQDGWFKGTSLRTAASGVFPGNYVTPVSRAPFGLGVARGSCLP
SPVGGSGCSPVANKSSDPSSPGSVGPSMSRPSPTLVTSSNSVHSRDLSPASSPQTAAAQL
KNCLRSNQHQARTSMQLIHSPPAGSPERPTVALSPLRPQSSSPSRCSGQSGRPLSMVSPG
SSLGPSPLSSPASRPILSLSSPLSCLTPPNMSPVLLNGDPASPQTPSPGPSHTPTSGSLA
PKAEKKERKAAGLLKLLSGAAAKKKPRSPTSSPPTHDPSLVGQGAVATDPTQNSHHHHHH
ARSGSCPLSSQGRAGSCPIESEMAGAIGLEPLHRKSGSLDTNFPMSPPATRAGSALMVFR
PEPKPLSRERYRVLVPYPPQSEAEIELREGDVVFVHKKREDGWYKGTLQRTGQTGLFPGS
FVESF
NT seq 2538 nt   +upstreamnt  +downstreamnt
atgcttaccctctccaccgacatggacgactcttcgtcgctcttggatctgttggagtgc
tcggtgtgcctggagcgcctggacaccacggccaaggtgctgccgtgccagcacaccttc
tgccgccgctgcctggagaacattgtcagctccaggagcgagctacgctgccccgagtgc
cgcatcttggtggactgcggtgtggacgacctgccagccaacatcctcctggttcgcctg
ctggatgggatcaagcagcggccgcagcgaggaggaagcggaggcggaggaggtgctggg
gctggtggcactggcaggcagtccctacccggtggttccctgcaggggtacgcagcgggg
atatccgcgtcccctccgggcactgcagtcagagagctgccggttgccaccaggagctcc
cccgttaagaatattcctgcactaccttgtggtaaagcgctctactcctacgagggcaag
gaaccaggtgaccttcagttttccaagggtgacataatcatcctgcgccgcaaggtggat
gacaactggtaccatggagagctcaatggttgccatggtttcttgccggccagctacatc
cagctgatacgtcctctgagtcaaactccaccacaaggcaaagcattgtacgactttgag
gtcaaagacaaagaccaggacaaagactgtctggcctttagcaaggatgaggtgctgaca
gtaatcaggcgagtagacgagaactgggcagagggcatgctgggagacaagattggcatc
tttcccattctgtatgttgagttaaatgaaacggcaaagcagttgatggagattgataag
cctatgccagctaatgcacctggtacaagctctgagccagcactcctgggatcctgcagt
ctgggatcatccccagtcgcctccccacctaatggaaatggctctggtcatcgcagagga
gaaggaaagaaaaacgccaagaagcggcactcgttttctgccctgtccgtcagccagagg
accacccagctcaacaacagacacagcatggaaatctcacatcctgtccttatcagctcc
tcagaccccagagctgcagcacgcatccaggatgcacctaccccaggcccatctctctcc
tcagcaggactaccgctcccccccaaagtagcatctttaacctctgagctgctggcccac
gctaaggtgcagctgcctctcaatatatacctggctctttatgcctataagccccaaaag
gccgatgagctggagctaagaaaaggagagatgtacagggtgacagagaagtgtcaggac
ggatggttcaaaggcacctcactgagaacggctgcctctggtgtctttccagggaactac
gtgacccctgtgtccagagctccatttggacttggtgttgctcgtggctcatgtttgccc
agtccagtcggaggaagtgggtgcagtccggttgcaaacaaaagttccgacccgtcgtcg
ccagggtctgtgggtccctccatgtcccgtccctcccctacacttgtgacctcatcaaac
tcagttcacagcagggacctcagccccgcctcctctccacaaactgctgccgcccagctt
aagaactgcctgcgctccaaccagcaccaagcgcgtacctcaatgcagctaattcacagt
ccacctgctggaagcccagagcgtcccactgtggcattatctcccttgcgtccccaaagc
tcatctccttcccgctgctccggccagtcaggccgtcctctttctatggtttctccgggc
tccagcttagggccttctcctctatcctcccccgcttcacgacccatcctctcgctgtcc
tcacctctttcctgcctcacgcctccaaacatgtcgcctgtgctgctcaatggggatcca
gccagtccacaaacaccatctccaggcccttcacacactccaacctctgggagtctggcc
cccaaagcagagaagaaggagagaaaagcagcgggcttgttaaagctcttgtcaggtgca
gccgccaagaagaaacctcgctcgcccacatcttctccacccacccatgacccctcactg
gtcggccaaggcgctgtggccactgaccccactcagaactcgcaccaccatcaccaccat
gcccgctcaggttcctgtccactgtcatcgcaggggagagccggctcctgtccaatcgag
agtgagatggcaggtgcaatagggctggagcctctgcacaggaagtcaggttcactggat
actaactttcccatgtcacccccagcaacacgagctggcagtgctttgatggtcttccgg
cccgaacccaaacccttgtcaagagagaggtatcgcgtgttggttccctaccctcctcag
agtgaggcggagatcgagctgcgagaaggggatgttgtgtttgttcataagaagagggag
gacggttggtacaaaggcaccctgcagaggacgggacagaccggcctgtttccaggcagc
tttgttgagagcttttga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (14)   
   Pfam (14)   
All databases (76)   

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