KEGG   Oryzias latipes (Japanese medaka): 110017206
Entry
110017206         CDS       T02443                                 
Name
(RefSeq) integrin alpha-M-like isoform X1
  KO
K06461  integrin alpha M
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04145  Phagosome
ola04514  Cell adhesion molecules
ola04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:ola00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    110017206
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110017206
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    110017206
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ola04131]
    110017206
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ola04147]
    110017206
   04515 Cell adhesion molecules [BR:ola04515]
    110017206
   04090 CD molecules [BR:ola04090]
    110017206
   00536 Glycosaminoglycan binding proteins [BR:ola00536]
    110017206
Membrane trafficking [BR:ola04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    110017206
Exosome [BR:ola04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110017206
Cell adhesion molecules [BR:ola04515]
 Integrins
  Integrin alpha subunits
   110017206
CD molecules [BR:ola04090]
 Proteins
  110017206
Glycosaminoglycan binding proteins [BR:ola00536]
 Heparan sulfate / Heparin
  Adhesion molecules of cell surface
   110017206
SSDB
Motif
Pfam: VWA ITGAX-like_Ig_3 FG-GAP Integrin_A_Ig_1 Integrin_A_Ig_2 VWA_2 FG-GAP_2 vWA-TerF-like Copine
Other DBs
NCBI-GeneID: 110017206
NCBI-ProteinID: XP_023805042
Position
19:7850760..7869450
AA seq 1132 aa
MDWIFFATLIWFVLEAALCFNLDPVAWKSLSSGDAGFGHQMVLRQSDLLVGAPLQQNSRN
RRGNILKCSNGRCVTENISDGMLAVNMSLGLTMTSDPSTQNTLVCGPTIPTACKHITMYN
GVCIELDRYNRVTRRVPSVLPQCKKANIAFLLDGSGSVSGTDFTKMKEFVTNLISSLQQE
DAKFAVAQFSRGYETYFDFNTYSPYNWKTKVNEIKQLRGITNTAGAIKNIVRGVFSGAFP
SNADIILIVITDGESSDSGQLPSAINEAQSANIVRYAIGVGRAFTSSRGKRELDLIASYP
PQKHVFQVESFQALENIRTTLQSQIFPIEGSQTGGNTLKMEMSQEGFSAAYGPMGVQMGI
VGANQWKGGYKRYGNSASVSYESEKMETDSYLGYSMAVATTTRGALTILGGPRYQHRGAV
EVVFRDTFKQVINPSQLQAGEYFGAVLCAMDVDNDSFSDLILISSPMYKEADREGRVYVC
TIVLFNIECSFERPSSQTILRGDPTTKGRFGSALAVLPDLNMDTFNDLAVGAPLEDDGQG
SIYIFHGERDKSINPTYSQRISASEVQSGLKFFGVSFTQWSSDQSGDRLPDLVVGSKGTV
VFLRSRPIVTVEPSVTFSPEKISTQDENCSKDLKTTARVCFIMKTRTAVDTAEAKITYTL
TLDATRKFPNSRAYIAEKQRHQTSSLEVGLRKDECHSIEFFIQACPEDALNPLNNELSFK
FEGLPSSTNLRPSLGHQSMTTFHPMEFEINCGADQTCMDNLKVDFNFSSSALVKVGIDEL
VNVTVSLENREENSYNSHVTLTYPAGISYRKFTIIKGRIECNSSDSEDGQSRGNTLCTVD
KPIFKSKSKAIFIVSYGIETNSQVGRQISITANASSGNQQHSSLSELYKKKEIDVKYSIL
VTIEGSHIYRNFSFGKDLKKPFQQSAEVTNNFRALNLTVVIEVPIKLGDKDIWGDGESLQ
IPDCQSVKDDKPTITDFTDQVKKTKIVDCSVATCRTFKCRRFMEKQEKITHTISANLTSG
WIEQIGLSSSRFLLISTVSLEYDQDQYIFFSTTSTHKPPVRKLEAEVEIYSDPDFTKEIV
GGSLGGLAFVALVTAGLYKGGFFKSKYSQMINENANAVDPDADPDTGAPPEA
NT seq 3399 nt   +upstreamnt  +downstreamnt
atggactggatattttttgcaactcttatctggtttgtattagaagctgcactttgtttc
aatctcgatcctgtggcttggaagtccctgagttcaggagatgcaggttttggccaccag
atggtgctaaggcaatcagatttgcttgttggtgcacctcttcaacaaaactcgagaaat
cgaagaggaaatatactgaaatgctccaatggcagatgtgtaactgagaacatttcagat
ggaatgttggcagtgaacatgtccctcggtttgacaatgacaagtgatccgtctacacag
aacactttggtgtgtggcccaaccattcccactgcatgcaaacatattaccatgtataat
ggcgtgtgcattgagttggacagatataaccgcgtgacacgccgtgttccatctgttctt
ccgcaatgtaaaaaagcaaacattgcatttctattggatggctcaggcagtgtttctgga
acagactttaccaaaatgaaggaatttgtgacaaatctcatcagttcacttcaacaagaa
gatgcaaagtttgcagttgcccagttttctagaggatatgaaacctactttgattttaat
acatattccccctataactggaagacaaaagtaaatgaaataaagcagctgaggggcata
actaatacagctggagccatcaagaatattgtgcgtggagttttctctggtgcttttcca
tcaaatgcagatataattttgatagttattactgatggagaatcgtctgactctggacag
ttgccatcagcaataaacgaagctcagtcagccaatattgttcgatatgctattggggtg
ggcagggcattcacctcctctagaggaaaaagggagcttgacttgattgcatcttaccca
ccacaaaagcatgtgtttcaagtagagagctttcaggcacttgagaacataagaacaact
ttacaatcccagatttttcccattgaaggatctcagactggtggaaacacactgaaaatg
gaaatgtcccaggagggctttagtgctgcttacggccctatgggagttcagatgggaatt
gttggtgctaaccagtggaagggaggctataagagatacggcaacagcgcgagtgtgtcc
tatgagtctgagaaaatggagactgacagttatcttggttactccatggcggttgctacg
actactagaggtgcactgacaattttggggggtccaagatatcagcacagaggagctgta
gaggtggtttttcgggacacatttaaacaagtaatcaaccccagtcaacttcaggctggg
gaatattttggcgcagtgctttgtgccatggatgtggataatgacagcttctctgatctg
atcctcatatcttctccgatgtataaggaggctgacagagaaggacgagtctatgtctgc
acaatagttctgtttaacatagagtgttcctttgaaagaccatcctcacaaaccatatta
agaggagatccaacaaccaagggacggtttggatctgctctcgctgttctgcctgatctg
aacatggatacatttaatgatctagcagttggagcacctttagaggatgatggtcaaggc
agtatttacatattccacggtgaacgggacaaaagtatcaatcctacctattcacagaga
atctctgcttctgaagtgcagtcaggactgaagttctttggcgtctccttcactcagtgg
tcttctgatcagagtggtgacagactgcctgacttagtggtgggttcaaagggcacagta
gtttttctcaggtccagacctatagtgactgtggaaccttctgttaccttcagcccagag
aaaatttcaacacaggatgaaaactgctcaaaagatctgaaaaccacagccagagtctgc
ttcatcatgaaaacacgaactgctgttgacacagctgaagcaaaaattacttacactcta
acactggatgccacccgaaagttcccaaacagccgagcttacattgctgagaaacaacga
catcagactagctcacttgaagttggcttgagaaaagatgagtgccactccattgaattt
ttcattcaggcttgtccagaagatgctctgaatccacttaacaacgagctcagttttaaa
tttgaaggtttgccttccagcacaaatcttagaccaagtcttggtcatcaatctatgaca
acctttcatccgatggagtttgagatcaactgtggcgctgatcagacatgtatggataac
ctgaaagtggatttcaacttcagcagctctgcgttggttaaagtgggcatcgatgaactt
gtgaatgtaacggtatcactggagaacagagaggaaaactcatacaacagccatgttact
ctcacatatccagctggaatctcctacaggaagttcaccatcattaaggggagaattgaa
tgcaactcttcagacagtgaggatggtcaaagtcggggaaacacactatgcacggttgat
aaaccaattttcaaaagcaaatctaaggctatttttatagtttcctatgggattgaaacc
aacagtcaagttggcagacagatctccatcactgctaatgcctccagtgggaatcagcag
cactcctctttgagtgaactctacaagaaaaaggagattgatgtgaagtacagcattctg
gttacaattgaggggtcccacatctacaggaacttctcttttggaaaagacttgaagaaa
ccattccaacaatctgcagaggttacaaacaatttcagggcattaaatctgactgttgtg
atcgaggttcctataaaactcggagacaaagacatttggggagatggggaaagtctgcag
attccagattgtcaaagtgtaaaagacgataaaccgaccatcactgactttactgatcaa
gtaaagaagaccaaaatagtggactgctctgtagccacatgcaggacattcaagtgcaga
aggttcatggagaagcaggagaaaataacacataccatctctgccaatctgacttcaggg
tggatagaacagattggactttcttcctccagattcctcctgatcagcacagtcagtctt
gaatacgaccaagatcagtacatctttttctccacaacttccacccacaagcctcctgtt
cgcaagcttgaagcagaagtggagatttactctgatccagatttcactaaagagattgtt
ggaggatctctgggagggttggcatttgtggccttggttactgctggcctatataagggt
ggattctttaagagcaaatacagtcaaatgattaatgaaaatgcaaatgcagtggatcca
gatgcagatccagatacaggagcccccccagaggcataa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (40)   

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