KEGG   Ostreococcus lucimarinus: OSTLU_10376
Entry
OSTLU_10376       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
olu  Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:olu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:olu03009]
    OSTLU_10376
Enzymes [BR:olu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     OSTLU_10376
Ribosome biogenesis [BR:olu03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    OSTLU_10376
SSDB
Motif
Pfam: PseudoU_synth_2 S4 ThiS S4_2
Other DBs
NCBI-GeneID: 5006108
NCBI-ProteinID: XP_001421818
JGI: 10376
UniProt: A4S8U3
Position
16:<34861..>35574
AA seq 238 aa
RREADAAVSAGRVLVNGELVRPSQRVKAGDVVTLDGKVMLWEAYARRVEEEIANDATSSF
VYLLYNKPRGVVCTMEPHQRTSLHFALERERARMKKIRIFPVGRLDKDSSGLVLLTNDGR
VSDALLDPSRKAEKEYDVDVDRDVSAADVERLAAGVVITTLQQRTMTETTAPTQPCEVRK
IGPRTLRFVLKEGRNRQIRKMCEALSYDVTRLHRTRIAELELGDLEIGGLRPLDVDEL
NT seq 714 nt   +upstreamnt  +downstreamnt
cgtcgcgaagccgacgccgcggtgagcgcggggcgtgtactcgtgaacggtgagctcgtg
cgtccgtcgcagcgcgtcaaggcgggagacgtggtgactctggacggcaaggtgatgctc
tgggaggcgtacgcgagacgcgtcgaagaggaaatcgcgaacgacgcgacgtcgtcgttc
gtgtatttgttgtataataaacctcgtggcgtcgtgtgcacgatggaaccgcatcaacga
acgtcgttgcatttcgcgctcgaacgcgagcgcgctcgcatgaaaaagatacgaatattt
ccagtcggtaggctcgacaaggattcgagcgggttggtgctgttgacgaacgacggacgc
gtgagcgatgctttgctcgatccgagcaggaaggcggagaaagagtacgacgtagatgtc
gatcgtgacgtgagcgcggccgacgtcgagcgtctggccgcgggggtcgtcatcacgacg
cttcaacagcgaacgatgacggagacgacggcgccgacgcagccgtgcgaggtgagaaag
atcggacctaggacgctgcgtttcgttttgaaggaaggaagaaatcgacagattcgaaag
atgtgcgaagctttgtcgtacgacgttacgcgattgcatcgaacgcgcatcgccgagctc
gagctcggcgacttggaaatcggcggcttgcgtccgctcgacgtcgacgagctg

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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