KEGG   Ostreococcus lucimarinus: OSTLU_119620
Entry
OSTLU_119620      CDS       T01029                                 
Symbol
Tf2aS
Name
(RefSeq) Transcription initiation factor IIA gamma chain, probable
  KO
K03123  transcription initiation factor TFIIA small subunit
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    OSTLU_119620 (Tf2aS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:olu03021]
    OSTLU_119620 (Tf2aS)
Transcription machinery [BR:olu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIA
     OSTLU_119620 (Tf2aS)
SSDB
Motif
Pfam: TFIIA_gamma_N TFIIA_gamma_C
Other DBs
NCBI-GeneID: 5000343
NCBI-ProteinID: XP_001416452
JGI: 119620
UniProt: A4RSQ2
Position
2:complement(join(657895..658230,658279..658284))
AA seq 113 aa
MSLELYRRSSLGMALTDALDELVISGVLSPTIAMKVLSEFDKSVCRSLRASKVKASVKGQ
LHTYRFCGNVWTFIVENAIVNIADVDVQSKEVRVQLLKVVACDSKLGDVSGSV
NT seq 342 nt   +upstreamnt  +downstreamnt
atgtcgctcgaactgtatcgtagatcaagcttaggaatggcgctgactgatgccctagac
gagttggtcatcagtggagtattatcgccaacgatcgccatgaaggtgcttagtgagttc
gataaaagtgtgtgtaggtcacttcgagcttcgaaagtaaaggcgagcgtaaagggtcag
ctacatacgtatcgcttttgtggaaacgtctggacatttattgtcgagaatgcgatcgtg
aatatcgcagatgtggacgtccagtctaaggaggtcagagtgcaactgctcaaagtcgtg
gcttgtgacagtaaactcggagacgtgagcggtagtgtgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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