KEGG T01029: OSTLU

Ostreococcus lucimarinus: OSTLU_26493

Entry

OSTLU_26493 CDS T01029

Definition

hypothetical protein

Orthology

K10777

DNA ligase 4 [EC:6.5.1.1]

Organism

olu Ostreococcus lucimarinus

Pathway

olu03450

Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:olu03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 994 aa
MDDVANDSGHRLGTRDGGDDDDDDAEEDGARLTSEPSTSGASLRYATARDVPFRKLCGAF
EALQNERGRSKATSARRYRVLDTLHDRCLVSARDGTRVDAFDAYRLILPALDKERGAYFL
KHDALAKVVVSAFDMSRASEDAKKLEDWKRKGGGNFPQVVRDVLAGGHLADREKDEDART
LTIGDVNEALDALAACDNKDQRASTLRALFSKMDATQVKWTCAIILKETKISMGEKAILR
HYHSEANDLWDWTSDLRRVCEDLPRRDFRMKREDIDVGVGLINPQMARRQNSIDAVYRAL
KGTQFVIETKFDGERIQIHKDGDIINYWTRNMNDFGPRGYDVMNALFRHLPKRCILDGEL
MVWNKLRDQSYPFGALKNLIKAANMRKAKDELFPLKAHLENRDGGDSDGEEDLMSSKYAW
YAENVKKLTYGDLELVYVPFDILYAVDRSVKTHKLRERHELLKEHVREVSVMCGNIRARI
LLATPDCAFSRVGSTKEDIERALLEAMDNGEEGLVIKDLDGPWIPGDRSNNWMKIKPDYL
SSEDLDVVLIGGYYGAGELRGGKISQFLCGIVEATNDPISTASDGVKIMSFCKVGTGISA
MQLDDLRSRLGDFMHREKPQDMNYNVTDAYNEKPDVWIWPPQRSLVVTVKGDIRAIRTTT
FATGYSLRFPRVTGIRYDKKWSDILTLCDLLKTIEEEVPTLKVNIDDTRGGTNARKRSRT
TGPATLLPAHLMPVDVSGVVQESEIFKNMQVHIANCESREQKQELFKAVIARSGTTSELW
HKHVTHSVALNRDGSKFRTASREGDVYTIAWLQECIHEGRVVPPKPRHRLHLSATTWYGT
DAMDRYGDDHFSDCNLADVHALVHQVGDQTKRWKTAEVPALVELDREYPSVCADVKLLTF
RGCVFEIDDSLGKDARVDEQSSMFPSVLAGERRNVEQILRIYGGKLAPEGRMGTHIVRMY
DDSVVFEDMDDGRKQVSLSWVKRCIDRSTTADVV

NT seq 2985 nt +upstreamnt +downstreamnt
atggacgacgttgcgaatgattccgggcaccgtctcggaacgcgcgacggcggcgacgac
gacgacgacgacgcggaagaggacggcgcgcggttgacgagcgaaccttcgacgtcgggc
gcgtcgctgagatacgccaccgcgcgcgacgtgccgtttcgaaagctgtgcggcgcgttc
gaggcgttgcagaacgaacgcggtcggtccaaggcgacgagcgcgcggcggtatcgagtg
ctcgatacactgcacgatcgatgtctcgtgagcgcgcgcgatggaacccgcgtcgacgcg
ttcgacgcgtatcggttgatactgccggcgttggacaaggaacgaggggcgtatttcttg
aaacacgacgcgttggccaaggtggtggtgtcggcgttcgacatgtctcgagcgagcgag
gacgcgaaaaagttggaggattggaaacgaaagggtggcggtaactttccgcaagttgtt
cgagacgttttggcgggtggacatctcgcggatcgtgagaaagatgaagacgcgcgcacg
ttgaccatcggagacgtgaacgaggcgttggacgcattggcggcgtgcgataacaaggat
cagcgcgcgtcgacgctgcgggcgctgttttcaaagatggatgcgacgcaagtgaaatgg
acgtgcgcaatcatattaaaggaaacaaaaatttcaatgggagagaaggcgatattgcgt
cattatcactccgaagcgaatgacttgtgggattggactagcgatttgcgaagagtttgt
gaagacttaccgcggcgagacttccggatgaagcgcgaggacatcgatgtgggcgtaggt
ttaattaatcctcagatggcgagaaggcaaaacagcatcgatgccgtgtaccgcgcgttg
aaaggtacgcagtttgtcatcgaaaccaaattcgacggcgagcgcattcaaattcacaaa
gacggcgacatcatcaactactggacgagaaacatgaacgattttggccctcgtggctac
gatgtgatgaatgctctctttcgtcatttgccaaagcgatgcattctcgacggcgaactc
atggtttggaacaagcttcgcgatcagtcgtacccgttcggcgcgttgaagaatctcatc
aaggctgcaaatatgcgcaaggccaaggatgaattgtttccactcaaggcacacctcgaa
aaccgtgatggtggtgatagcgacggtgaggaggatctcatgagctccaagtatgcgtgg
tacgccgagaacgtaaagaaactcacgtatggagacttggaattggtctacgttccgttt
gatatattgtatgccgtcgatcgaagtgtgaagactcataagctgagagagcggcatgaa
cttttgaaagagcatgtgcgtgaagtatcagtcatgtgtgggaatattcgtgctagaatt
cttctcgcgacgcccgattgcgcgttctcacgtgtaggctcaacgaaggaggatatcgag
cgcgcgctgttagaagcgatggataacggagaggagggattggtaatcaaagatctcgac
ggtccatggataccaggtgatcgtagcaataactggatgaaaatcaaaccagactactta
tcgagtgaagatttggacgtcgttctcatcggcggctattacggcgccggtgagttgcgc
gggggcaaaatttcgcagttcctctgtggcattgtggaggcaacgaacgatccgattagc
accgcttcagatggagtcaaaatcatgagcttttgcaaggtaggtactggtatcagcgcc
atgcagctcgacgatttgagaagtcggctaggcgacttcatgcacagagaaaagcctcaa
gacatgaactacaacgtcacggatgcttacaacgaaaagccggacgtttggatctggcct
cctcagcgatcattggttgtgacggtgaaaggtgacattcgtgcgattcgcacgacaact
ttcgcaactggttacagcctgcgtttcccccgcgtcaccggtattcgatatgacaaaaaa
tggtccgacatcttgacactctgcgatctcttaaagacgattgaagaggaagtaccgaca
ttgaaagtgaatatcgacgatacacgaggcggtacgaatgcccgaaagcgttcgcgcacg
acgggacccgcgacgctactacctgcacatctcatgccggttgacgtttcgggcgtcgtg
caggaatctgaaatcttcaaaaacatgcaagtgcacatcgcgaactgtgaaagtcgagaa
caaaagcaggagctgttcaaagctgtcatcgcacgtagtggtactacgagtgagttgtgg
cacaagcatgtgacgcacagcgttgcgttgaaccgcgacggctcaaagttcaggacggcg
agtcgggaaggcgatgtgtacacgattgcctggctccaagagtgcattcacgaaggacgt
gtggtaccgccgaaacctcgacatcgcttacatctctcagcgacgacgtggtatggtacg
gatgccatggatcgatacggagatgatcatttctcggactgcaatttggccgacgtacac
gcgctcgtgcatcaagttggcgatcaaactaagcgttggaaaactgccgaagttccagca
ttggtggagctcgatcgcgagtatccatcggtgtgtgctgatgtgaaacttttgacgttt
aggggttgtgtgttcgagattgacgattctctcggcaaagatgcgcgtgttgatgagcag
agtagtatgtttccaagtgtgctggcgggcgaacgtcgaaacgtcgaacagattcttcgg
atttatggtggaaagctcgcacctgaaggcagaatggggacacatattgtgcgcatgtac
gatgactccgttgtctttgaagatatggatgatggaagaaagcaagtttcgctctcttgg
gtgaaacgttgcatcgaccggtcgacaacggctgatgtagtctaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-OLU (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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