KEGG   Ostreococcus lucimarinus: OSTLU_37824
Entry
OSTLU_37824       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OSTLU_37824
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:olu03019]
    OSTLU_37824
Enzymes [BR:olu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     OSTLU_37824
Messenger RNA biogenesis [BR:olu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     OSTLU_37824
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     OSTLU_37824
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2 DNApol_Exo
Other DBs
NCBI-GeneID: 5006106
NCBI-ProteinID: XP_001422066
JGI: 37824
UniProt: A4S9H4
Position
16:complement(418857..419771)
AA seq 304 aa
MAQNAAAATSVRVVTYNILAQVYAKSAWFPWTPRALMKSKARRANVQKKLLALDADLMAL
QELDGYEPSEENDARWKSWLREHGYESRYVQRTKKSNAKKDGSCVAWRASTFALEDSRNL
EYNDIGYDLYGRDDANDETNENEARRRYLRDCVGNLTLLRRIKDGALVVFASTHLYWDPE
CADVKLAQAKMLIAECVKFRDEALIRAEGRPVHVIIGGDFNSDPQSDVYGAMNAAFTSVS
NGREPQFTNVTPSFTACIDYVFLSSGVRVVAVDEQPARDTLGEGLPNTGHPSDHLPVAAK
IEFD
NT seq 915 nt   +upstreamnt  +downstreamnt
atggcgcaaaacgccgccgcggcgacgagcgttcgagtcgtcacatacaacatcctcgcg
caagtatacgccaagagcgcgtggtttccgtggacgccgcgcgcgctgatgaagtcgaaa
gcgcgccgcgcgaatgtacagaaaaaactactcgcgctcgacgccgacttaatggcgctt
caagagctcgatgggtacgagccgagcgaagagaacgacgcgcgatggaagtcttggttg
cgcgaacacgggtacgagtcgcggtacgtgcagcggacgaagaagagtaacgcgaaaaag
gatggaagctgcgtggcgtggcgcgcgtcgacgttcgctttggaagattcgcggaatttg
gaatacaacgatatcggctacgatttgtacggccgagacgatgcgaacgacgaaacgaac
gaaaacgaggcgcgtcgacggtacttgcgagactgcgtggggaatttaacgctgcttcgg
cgaatcaaagacggcgcgctcgtcgtcttcgcgtcgactcacctgtactgggatccggaa
tgtgccgacgtaaagctcgcgcaggcgaaaatgttgatcgccgagtgcgtcaagtttcgc
gacgaggcgctaattcgagccgaagggcgtcccgtgcacgtcatcatcggcggcgatttc
aactcggatccgcaaagcgacgtgtacggcgcgatgaacgcggctttcacgtctgtctcg
aatggacgagaaccacagttcacgaacgtcacgccgagtttcactgcgtgcattgattat
gtgtttctgtcatccggtgttcgtgtcgtcgccgtggatgaacagcccgcgcgagacact
ctcggcgaaggcttgccgaacaccggacacccgagcgaccatcttccagtcgctgcgaag
attgaattcgattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (78)   
   KEGG ORTHOLOGY (1)   
   RefGene (72)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (90)   

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