KEGG   Ostreococcus lucimarinus: OSTLU_38697
Entry
OSTLU_38697       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K13117  ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
Organism
olu  Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:olu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:olu03041]
    OSTLU_38697
Enzymes [BR:olu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     OSTLU_38697
Spliceosome [BR:olu03041]
 Complex C
  Other components
   Complex C specific factors
    OSTLU_38697
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C HA2_N DEAD AAA_22 AAA_30 AAA_19 ABC_tran ResIII nSTAND3 AAA_7 ATPase AAA_23
Other DBs
NCBI-GeneID: 5001996
NCBI-ProteinID: XP_001417841
JGI: 38697
UniProt: A4RXZ6
Position
5:674673..676814
AA seq 713 aa
MAGFWRPGADAPSTSAPSTLLTLDVDADADATGTLIQFEKNPKASLSARRRALPIAAHAD
ELMYCVEKHQTTVIVGHTGCGKTTQIPQYLRDGGWCGGGATVAVTQPRRVAAQTVAQRVA
EEVGCVIGDTVGYAIRFEDVCTPGKTEIKFCTDGALLRELAEDPLLTKYSVVIVDEAHER
TLATDVLLGLLKKVQRARRDLRLIVSSATIQAESFAAFFDASGEDDDGDGPSRKPIIMSV
EGRAHGVLIHYLDEPTGDYVLSAVETALEVHRNEGPGDILIFLTGEGEIDDAVNLLEEEA
REMKRDPRRSHDALDLVVCPLYAGLNPAAQLEAFRPPRRGARKVVVATNVAETSVTIEGV
VYVIDSCFAKQKAFDPERGMESLFVAPASKASTNQRAGRAGRVRPGKCFRLCTEIDYRSL
ADVTAPEIVRSDLASTVLQIKAMGIDNIMNFEWVSPPPAANMIKALELLYALRALDDDAK
LTSPLGVHLAEIPLEPQLGKMLLVSGEMGCVREALTVAAYMQVQSLWVTHRGQKKRLDEM
RDRFAVEEGDAVMMLNIHDAYCDARNQAKFASNNMLNHRALLRAGDVRSQLKKHLARLGV
VTNSSCGDDTVPIRRAIAAGFFANAATLAPYGGGPDGSVFHSLRAMSARARARELRIHPS
SALFRSRPQCVAYCSAVRTDREYMRDVTVVEADWLRELAPHFYRAVSANPTTQ
NT seq 2142 nt   +upstreamnt  +downstreamnt
atggccgggttctggcgcccaggcgcggacgctccctcgacgtccgcgccgtcgactctc
ttaactctcgacgtcgacgccgatgccgacgccacggggacgttgattcaattcgagaaa
aatccgaaagcgtcgctgagcgcgcgtcgtcgcgcgctcccgatcgcggcgcacgcggac
gaattgatgtactgcgtcgagaaacatcaaaccacggtcatcgtcgggcacacggggtgc
ggaaagacgacgcagataccgcagtacctgcgagacggcggctggtgcggcggcggcgcg
actgtggcggtgacgcagccgagacgagtggcggcgcagacggtggcgcaacgcgtcgca
gaggaggtagggtgtgtgataggggatacagttgggtacgcgatacgatttgaggacgtg
tgcacgccggggaagacggagattaaattttgcacggatggagcgctgttgcgcgagctc
gcggaggatccgttgttgacaaagtattcggtggtgatagtggacgaggcgcacgagcgc
acgttagcgacggacgtgttgttaggattattgaagaaagtgcagcgcgcgagaagggat
ttgcggttgatcgtgtcgagcgcgacgattcaggcggaatcattcgcggcgttctttgac
gcgagcggcgaggacgacgacggcgatggaccttcgagaaagcccatcatcatgtccgtc
gaaggtcgagcgcacggtgtgttgattcattatctggatgaaccgaccggagattacgtg
ttgagcgcggtagagacggcgttggaagtgcatcgaaacgaaggaccaggtgatatatta
atctttctcacaggcgagggcgagatcgacgacgccgtcaacttgctcgaagaggaagcg
cgagagatgaaacgcgatccgagacggtcacacgatgcgctggatttagtggtttgtcca
ctgtatgcgggattaaatcctgcggcgcagttggaggcgtttcgaccgccgcgcagaggc
gcgcgcaaagtcgtcgtggcgacaaacgttgccgaaacgtctgtgacgattgaaggtgtc
gtgtacgtcatagattcatgctttgcgaagcaaaaggcgttcgacccagagcgcggcatg
gagagtttgttcgtcgcacccgcgagcaaggcgagtacgaaccaacgcgccggtcgcgcc
ggtcgcgtgcgtccgggtaaatgctttcgcttgtgcaccgagattgactatcgctcgttg
gccgacgtcacggctccggagatcgttcgaagtgacctcgcgagtacggttttgcagatc
aaggcgatgggtattgataatatcatgaactttgagtgggtgtcgccgccgcccgcggcg
aacatgatcaaggcgctcgagcttttatacgcgctcagggctttggacgacgacgccaag
ctcacgagtccgctcggcgtgcacttagccgaaatcccactcgagccgcagctagggaag
atgctcctcgtgagtggagagatgggatgcgtaagggaagcgttgactgtcgcggcgtac
atgcaagtgcagtcgttgtgggtcacgcatcgcgggcaaaagaaacgcttagatgagatg
cgcgaccgctttgccgtggaagaaggagacgcagtgatgatgttgaacatccacgacgcg
tactgtgacgcgagaaaccaggcaaagtttgcgagcaacaacatgctcaatcatcgagcg
ctgcttcgggctggagatgtacgcagtcaattgaaaaagcatctcgctagactgggagtc
gtcacgaattcgtcttgcggcgatgatacggtaccaattcgacgtgcgattgctgctggg
ttctttgctaacgctgcaacgctcgcgccctacggtggcggccccgatggttccgtcttt
cattctctccgcgcgatgagtgcgcgcgcgcgtgctcgagagctccgaatacatccaagc
tccgcgctgttccgctcgcgaccgcaatgcgtggcgtattgctccgccgttcgcacagat
cgcgagtacatgcgcgacgtcaccgtcgtcgaagccgattggttgcgcgagctcgcgccg
cacttctatcgcgcggtgagcgccaatccgacgacgcaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (63)   

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