KEGG   Ostreococcus lucimarinus: OSTLU_40630
Entry
OSTLU_40630       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    OSTLU_40630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:olu03021]
    OSTLU_40630
   03019 Messenger RNA biogenesis [BR:olu03019]
    OSTLU_40630
Enzymes [BR:olu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     OSTLU_40630
Transcription machinery [BR:olu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     OSTLU_40630
Messenger RNA biogenesis [BR:olu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     OSTLU_40630
SSDB
Motif
Pfam: Ssu72 Latarcin DUF4838
Other DBs
NCBI-GeneID: 5005719
NCBI-ProteinID: XP_001421639
JGI: 40630
UniProt: A4S8K5
Position
15:370006..370605
AA seq 199 aa
MSAERKRYAVVCAANFNRSMEAHKVLAERGLDVASFGAASRVKLPGASRDDPNVYDFDSI
TYEDIASDLERQPRETVENYEARGMFEMLRRNAKIKPAPQRWQTHSDRERFDVVVCFEER
VFDLVMEDLRAKGGAREGVLVVNLDVRDSHDSSVDAAPRALRLCEALEASEDWESEVDEI
MNAFEEAEGMRPLYGVCYY
NT seq 600 nt   +upstreamnt  +downstreamnt
atgtccgccgagcgcaagcgctacgccgtggtgtgcgcggcgaactttaaccgctccatg
gaggcgcacaaggtgctcgccgagcgcggactcgacgtcgcgagtttcggcgcggcgtcg
cgcgtcaagctcccgggggcgtcccgggacgacccgaacgtgtacgatttcgattcgatc
acgtacgaggacatcgcgagcgatctggagcgacaaccgcgggagacggtggagaattac
gaggcgagagggatgtttgagatgctgcggcgaaacgcgaagatcaaaccggcgccgcag
cgatggcagacgcacagcgatcgagagcggttcgacgtggtcgtgtgcttcgaggagagg
gtgttcgatctcgtgatggaggatctgcgagcgaagggaggggcgcgggagggggtgctg
gtggtgaatttggacgtgcgagactcgcacgattcgagcgtggacgcggcgccgagggcg
ttgcggttgtgcgaggcgttggaggcgagcgaggattgggagagcgaggtggatgagatc
atgaatgcgttcgaagaggcggaggggatgcgaccgttgtacggcgtgtgttattattga

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