KEGG   Ostreococcus lucimarinus: OSTLU_4352
Entry
OSTLU_4352        CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    OSTLU_4352
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:olu03400]
    OSTLU_4352
Enzymes [BR:olu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     OSTLU_4352
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     OSTLU_4352
DNA repair and recombination proteins [BR:olu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     OSTLU_4352
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH Fpg-like_C Ribosomal_S13 NFACT_N
Other DBs
NCBI-GeneID: 5004830
NCBI-ProteinID: XP_001420761
JGI: 4352
UniProt: A4S5E3
Position
12:complement(join(<117077..117333,117427..118000))
AA seq 277 aa
MPELPEVEKARRLVHDLAIGSPISRVHRPIIDDKVFVDVASGQFERALSGRKITHSKRHG
KQLWWQLDGNDALVPCFHFGMTGAFVARGIDGIQYYNSKASGTGDWPPRFAKLVVAFENG
VELAFVDPRRFGKIKLVADVAEVIGQLGPDPLLEMPNEEAFAALWRRRSAPIKTAIMDQK
VIAGIGNWMADEILYRARVHPETRANELSSTQLEAIRFRVTEVVKVACEANSDHDLFPDD
WLFHHRWGKTGGAKVNGDAIKFIEVGGRTTAFVPKLQ
NT seq 831 nt   +upstreamnt  +downstreamnt
atgcccgagcttcccgaggtcgaaaaagctcgtcgcctggtgcacgacctcgcgatcgga
tccccgatctcgcgcgtccatcgacccatcatcgacgacaaagtttttgtcgacgtcgca
tcgggacagtttgagcgcgcgctctcgggacggaaaatcacccacagtaagcgccacggt
aagcagttgtggtggcagctcgacgggaacgacgcgctcgttccgtgctttcacttcggg
atgacgggggcgttcgtggcgcgaggaatcgatgggattcagtattacaatagcaaggcg
agcggaacgggcgactggccgccgcggttcgccaagctcgtcgtcgcgttcgagaacggc
gtcgagctcgcgttcgtagacccgagaaggtttggaaagatcaaactcgtcgcggacgtc
gcggaggtgatcggccaactcgggccggatccgctgttggagatgccgaacgaggaggcg
ttcgcggcgctatggcgacgaaggagcgcgccgataaagacggccatcatggaccagaag
gtgatcgctgggatagggaattggatggcggacgaaattttataccgagcgcgagtgcat
ccggagactcgagcgaacgagttgagctcgacgcagctcgaagcgattagatttcgcgtc
acagaagtcgtcaaagtagcgtgcgaggcaaactctgaccacgatttgtttccagacgac
tggttgttccaccatcgctgggggaaaaccggcggagcgaaagtcaacggagacgcgatt
aagttcatcgaagtcggcggtcgcaccaccgccttcgtgcccaaacttcag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (53)   

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