KEGG   Ostreococcus lucimarinus: OSTLU_86070
Entry
OSTLU_86070       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
olu  Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:olu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:olu03016]
    OSTLU_86070
Enzymes [BR:olu01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     OSTLU_86070
Transfer RNA biogenesis [BR:olu03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    OSTLU_86070
SSDB
Motif
Pfam: Dus zf-CCCH zf-CCCH_4 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 4999525
NCBI-ProteinID: XP_001415794
JGI: 86070
UniProt: A4RQU5
Position
1:complement(303263..305089)
AA seq 608 aa
MSSDVGAPWTPPTSAELFASGTVVVKREFLVEPRPPPPLDAATHADAGDAAPISGGGTFG
AFNKRAKFAEKSRADKPRERGLCNQLTREGKCAFGDACKYSHDVDAFLKTKPPDLPGTCT
FVNKEGGCPYGVRCRYYGTHATGEGRDGATVAESTTTLEPPKTVEKEMNFVDKDVMVRLR
KKKYDFSRADTIVKEVLRAMETKKDEQTKAGEESAAKRAKVDEENRTDTGAFTKARVEEK
RTIDFKDKLYLAPLTTVGNLPFRRVCKTLGADITCGEMALCTSLLQGLPSEWALLRRHKS
EDIFGVQICGGYPDSVTRCCQLLEDTIDVDFIDINMGCPIDSVCQKGYGSMMLEKPKKME
TVIRAASAALGKCSLTFKTRMAYTDKSRVAHTFAPKVAEWGAAAMTLHGRTRAQRYRSVA
DWEYTKLTKESSSVPLIGNGDVYMQKDYYTHLEEHSVDTCMLARGALIKPWLFTEIKERR
DWDISSRERFDILKSFASFGLEHWGSDTRGVESTRKYLLEWMSFTYRYTPIGLLDHSYGA
AAMTQRPPAFVGRDDLETLMASEASSDWVKISTMLLGPPPEGFAFQPKHKSNAYASESGA
ALGDMDQG
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgtcgagcgacgtcggcgcgccgtggactccgcccacgtccgcggagctcttcgcgagc
ggtaccgtcgtcgtcaagcgcgagtttctcgtcgagcccagaccaccgccgccgctcgat
gcggcgacccacgccgacgccggcgacgccgcgccgatctcgggcggcggcacgttcggc
gcgttcaacaaacgcgccaagttcgccgaaaagtcgcgcgcggataagccgcgcgagcgc
gggctgtgcaatcagttgacgcgcgagggaaagtgcgcctttggcgacgcgtgtaaatat
tcgcacgacgtcgacgcgtttttgaagacgaaacctcccgatttgccggggacgtgcacg
ttcgtgaataaagagggcgggtgcccgtacggggtgcgttgtcgatattacggaacgcac
gcgacgggggagggtcgggacggcgcgacggttgccgagtcgacgacgacgctcgagccg
ccgaagacggtggagaaggagatgaatttcgtggacaaggacgtgatggtgcggttacgc
aagaagaagtatgatttttctagggcggatacgatcgtgaaggaagtgttgagggcgatg
gagacgaaaaaggatgagcagacgaaagcgggcgaggagagcgcggcgaaacgcgcaaaa
gtcgacgaagaaaaccgtacggatacgggtgcgtttacgaaagcgcgcgtcgaagagaag
agaacaatcgacttcaaagacaagctgtacctagctcctttgacgacggtcggaaattta
ccgtttcgtcgcgtttgcaagacgcttggcgccgacatcacgtgcggtgagatggcgttg
tgtacgagtttactgcaaggactcccgagtgagtgggcgcttcttcgtcgtcataagagc
gaagacatttttggggtgcagatatgtggtggttacccagactcagtcaccaggtgctgc
caattactcgaagacacgatagacgtcgactttatagacatcaacatggggtgcccgatc
gactccgtgtgccagaaaggatacgggtcgatgatgctcgagaaacccaagaagatggaa
acagtcattcgtgctgccagcgcggcgcttggcaagtgttcgctaacgttcaaaacgcgc
atggcgtacaccgataaaagtcgagtcgcgcacacgtttgcgccgaaagtcgccgaatgg
ggcgcggcggcgatgacgcttcacggacgcacgcgcgcgcagcgataccggagcgtggcg
gattgggagtacaccaaattaacaaaagagtcgagctcggtacctttgataggtaacggc
gatgtatacatgcaaaaggattactacacccatctggaggaacactccgtggacacgtgc
atgctcgctcgcggcgcgctcatcaagccgtggctgttcaccgaaatcaaagagcgtcgc
gactgggacatttcgtcgcgtgagcgattcgatattttgaaatcattcgcctctttcggg
ctcgaacactggggaagcgacacgcgaggcgtggagtcgacgcgcaaatatttgctcgag
tggatgtcgtttacgtatcgctacacccccatcgggttgttggatcacagttacggcgct
gccgcgatgacacagcgcccaccggcgtttgttggacgggacgatttggagacactcatg
gcgagcgaggcgagtagcgattgggtgaagatctccacaatgctcctcggcccgccgcct
gaaggattcgcatttcagccaaagcacaaatcgaacgcttacgcgagcgagtctggcgcc
gcgctcggcgatatggaccagggatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (58)   
   KEGG ORTHOLOGY (1)   
   RefGene (52)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (71)   

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