KEGG   Oscillatoria nigro-viridis: Osc7112_5094
Entry
Osc7112_5094      CDS       T02375                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
oni  Oscillatoria nigro-viridis
Brite
KEGG Orthology (KO) [BR:oni00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oni03032]
    Osc7112_5094
   03400 DNA repair and recombination proteins [BR:oni03400]
    Osc7112_5094
Enzymes [BR:oni01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Osc7112_5094
DNA replication proteins [BR:oni03032]
 Prokaryotic type
  DNA Topoisomerases
   Osc7112_5094
DNA repair and recombination proteins [BR:oni03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Osc7112_5094
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4 Toprim_2 DUF6429
Other DBs
NCBI-ProteinID: AFZ09356
UniProt: K9VN25
Position
complement(6079462..6082197)
AA seq 911 aa
MSTLVIVESPTKARTIRNFLPSTYRVEASMGHVRDLPSSAEEIPEAVKGEKWAQLGVNVE
ADFEPLYVIPKDKKKIVKELKDALKDATELILATDEDREGESISWHLLQILKPKVPIKRM
VFHEITREAIRDALTHCRDIDNRVVQAQETRRILDRLVGYTLSPLLWKKIAWGLSAGRVQ
SVAVRLLVRRERERRAFRQGSYWDLKALLEKGKISFDAKLVTVGNVKVANGSDFDENTGQ
IIAGRRVLLLNEEQARALLSRIQNKPWTVTNLEERPVTRKPSPPFTTSTLQQEANRKLRL
GARETMRIAQSLYERGFITYMRTDSVHLSEQAIEAARSCVQELYGSEYLSPQPRKYTTKS
KGAQEAHEAIRPAGSTFRTPQQTGLDGIDFRLYDLIWKRTVASQMADSRQTHVTVLTQVE
DAGFRSSGKRIDFPGFLRAYVEGSDDPNAALEDQEVILPALKVGDKPNCQDLEAVGHETQ
PPARYTEASLVKMLESEGVGRPSTYASIIGTIVDRGYAKLIANALIPTFTAFAVTTLLET
HFPDLVDTGFTSRMEQTLDEIATGEAKWLPYLQKFYTGETGLATQVKEQESHIDAKVART
VVLENLPAKVCIGKFGAYLESESEEGLVKASIPQDLTPADLDPEQVEFLLKQKTEGPEKL
GLHPETGEPIYVLIGSYGPYVQLGEVSETNKKPKRASLPKGTDKDSVTLDMAVSLLTLPR
LLGTHPETGAKVQANLGMYGPYVVHDQGKVGKDYRSIKPPDDVLTIELDRALELLAQPKA
ARGRNSKATTPLKELGAHPESGEPINVYDGRYGPYVKHGDINASLSKDESVENFTLQKAL
DLLAAKEAAGGGKSSSKSKKSTKATAAKSETATKKTAAKKTTAKKTTTAAKTTTAKKTAT
ATKTKKETKSS
NT seq 2736 nt   +upstreamnt  +downstreamnt
atgtcaaccttagtcatcgtcgaatctccgaccaaagcccgcaccatccgcaacttcctg
ccctccacctaccgtgtagaggcatcgatgggccatgtccgcgacctaccatcctccgcc
gaagaaataccagaagccgttaaaggagaaaaatgggcgcaactgggcgtaaacgtggaa
gcagactttgaacccctctacgtcatcccgaaagataaaaagaaaattgttaaagaactc
aaagacgccctcaaagacgccacagaactgattctagccactgacgaagaccgggaaggc
gaaagcatttcctggcatttgctgcaaatcctcaaacccaaagtgcccatcaagcggatg
gtgtttcacgaaatcacccgcgaagcaatccgcgatgctttgactcactgccgcgatatc
gacaatcgagttgtacaagcccaagaaactcgccgaattctcgacagactcgtcggttac
acactctctccgctactgtggaaaaaaattgcttggggtttgtcggccggtagagtgcag
tcagtcgctgtacgcctgttggtgcgccgggaacgggaacggcgcgctttccgccaaggt
agttactgggatttaaaagcccttttggaaaaggggaaaatttcctttgatgccaaactc
gtgacagtcggcaatgtcaaagttgccaacggcagcgattttgatgaaaataccgggcaa
attatcgcaggccgccgcgtacttttgctcaacgaagaacaggcgcgggctttactttca
cgcattcaaaacaaaccttggactgtcaccaatctcgaagaacggccagtcacgcgcaaa
ccttcgccgccgtttacaacctcgactttgcagcaggaagctaaccgcaagctgcggctg
ggtgcgcgggaaactatgcgaattgcccaaagtctctacgaacgcggttttatcacctat
atgcggacggattcggtgcatttgtccgaacaggcgatcgaagcggcgcgcagttgcgtg
caagaactgtacggcagcgaatacctcagcccccaaccgcgcaaatacacgacgaaaagc
aaaggcgcccaggaagcccacgaagctatccgtcccgccggcagcacttttcggactccg
cagcaaactggattggatgggattgatttccgcctctacgatttgatttggaagcggact
gtggcttctcaaatggccgattcccgccaaactcacgtcactgtattaactcaggtagaa
gatgccggtttccgttccagcgggaaacgcattgattttccaggctttttgcgcgcctac
gtggaaggttccgacgatccgaatgcggcgctggaagaccaggaggtgattttgccggcg
ctgaaggtgggggataaacctaattgtcaggatttagaggcagttggccacgaaactcaa
cctcccgcccgctacacggaagcttctctggtcaaaatgctggaaagcgaaggtgtgggc
cgtccgagtacctatgcgagtattatcggtacaattgtcgatcggggatatgcgaaatta
atagctaacgccctaattccgacattcaccgctttcgccgtcacgactttattggaaaca
cattttcccgatttagtagacaccggttttacttcccgaatggaacaaaccctcgatgaa
attgccactggcgaggcgaaatggctgccgtatttgcaaaagttttatacaggggaaacc
ggactcgcaacccaagtcaaagaacaggaaagtcacattgatgcgaaagttgcccgaact
gtggtattggagaatttgccagccaaagtctgcatcggcaaattcggcgcatacctggaa
tctgaaagcgaagaaggcctggtaaaagcatcgattccccaagatttgacgccggccgat
ttagatccggaacaagtggagtttctgttaaagcaaaaaacggaaggcccggaaaaattg
ggtcttcacccggaaaccggggaaccgatttatgtgctgattggcagttatgggccatac
gttcagttaggggaagtttcggaaacgaacaagaaaccgaagcgggcttctttaccgaag
gggacggataaggatagcgtgacgctggatatggcggtgagtttgttgacgttaccccgg
ttgttgggcactcacccggagacgggggcgaaggtgcaagctaatttggggatgtacggg
ccttatgtggtgcatgaccagggtaaggtggggaaagattatcgatcgatcaaaccgccg
gatgatgttttgacgatcgagctcgatcgggcattagaattgttagcacagccgaaagcc
gcccgcggccgcaacagcaaagccaccacacctttgaaggaattgggcgcgcatccagag
tcgggagaacccatcaatgtttacgacggccgctacggcccctatgtgaaacacggcgat
atcaatgcttctttgtcgaaggatgaatctgtggagaatttcaccttgcaaaaagcactg
gatttgttagcagcgaaggaagcagcgggcggcggaaaatctagcagcaagtcgaagaag
tctactaaggcaactgcggcgaaatcggaaactgcaacgaagaagactgcggccaagaaa
accactgctaaaaagacgacaactgcggcgaagacaaccactgctaaaaagacggcgact
gcgacaaagactaagaaagaaactaagtcaagttag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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