KEGG   Orcinus orca (killer whale): 101272842
Entry
101272842         CDS       T05247                                 
Symbol
NBN
Name
(RefSeq) LOW QUALITY PROTEIN: nibrin
  KO
K10867  nibrin
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03440  Homologous recombination
oor04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    101272842 (NBN)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    101272842 (NBN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oor03032]
    101272842 (NBN)
   03400 DNA repair and recombination proteins [BR:oor03400]
    101272842 (NBN)
DNA replication proteins [BR:oor03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    101272842 (NBN)
DNA repair and recombination proteins [BR:oor03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     101272842 (NBN)
    BRCA1-C complex
     101272842 (NBN)
SSDB
Motif
Pfam: Nbs1_C NIBRIN_BRCT_II FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl PTCB-BRCT
Other DBs
NCBI-GeneID: 101272842
NCBI-ProteinID: XP_049556196
Position
17:complement(41409799..41463158)
AA seq 748 aa
MWKLLPAAGSAREPYRLLAGVEYIVGRKNCGILIEDDQSISRNHAVLTANFSVTNLSQTD
EIPILTIKDNSKYGTFVNEEKMQNGLSRILKTGDRVTFGVFESKFRVEYEPLVACSSCLD
VSGKTALSQAVLQLGGLTVNNWTEECTHLVMTSVKVTIKTICALICGRPIVKPEYFTEFL
KTVQSKKQPPEIESFYPPIDEPVIGSKNIDLSERQERKQIFKGKTFVFLNAKQHKKLSAA
VVFGGGDARLITEDNEEDSFFSAPGTCVVDVGITDSQTLIPDSQKKRIHSIMDILQRQGL
RPIPEAEIGLAVIFITTENYCDPQGQPSTGLKTTTPGPSLSQVLPANENLMPGAPVNTTT
YVADTQSEQGNKCMNLSERPKEIKIFGMEQKFRIPSQETSTVKEPHKVNSSNNNIVSNTL
VSMKIPKCQLSPTKFPGVNKSGDWASQHQQTNSIKNYFQPSTKKRERDEENQEMSLSKSA
RIEMSCSLLEQTQPTTSSVWNNKEQQNEPVERNPDNSYADIDLKSTVKNSANKSLSTEKL
RSEKRKEIDDLAIENEVLEQLLKNAKPELEIEVKVQKQEEDVNIRKRPRLDIETNGPCND
EAIPESNKISQENEIAKNCELKXSLWSTKELSNNDELQGDGEMLPKTVLLTEFRSLVVRN
STSRNASSVNNDYGELKNFKKFKKVKFPGAGKLPHIIGGSDLIAHHTRKTTELEEWLRQE
MEVQNQHAKEESLADELFRYNPNIKRRR
NT seq 2247 nt   +upstreamnt  +downstreamnt
atgtggaagttgctcccagctgcgggctctgcccgagaaccatacagacttttggctggt
gttgagtacattgttggaaggaaaaactgtggcattctaattgaagatgatcaatcaatc
agccgaaatcatgctgtattaactgctaacttttctgtaactaacctgagtcaaacagat
gaaatccctatattgacaataaaagataattctaagtatggtacctttgttaatgaggaa
aaaatgcagaatggcctttcccgaattttgaagacaggggatagagttacctttggagtg
tttgaaagtaaatttagagtagagtatgaacctttggttgcgtgctcttcttgtttagat
gtctctgggaaaactgctttaagtcaagctgtattgcaacttggaggacttactgtaaac
aattggacagaggaatgtactcaccttgtcatgacatcagttaaagttaccattaaaaca
atatgtgcactcatttgtgggcgtccgattgtaaaaccagaatattttactgaatttctt
aaaacagttcagtccaagaaacagcctccagaaattgaaagtttttacccacctattgat
gaaccagttattggaagtaaaaatattgatctgtcagaacgacaggaaagaaaacaaatc
ttcaaagggaaaacatttgtctttctaaatgccaaacagcataaaaaattaagtgcagca
gttgtatttggaggaggagatgctaggttgataacagaagacaatgaagaagatagtttc
ttttcagctcctggaacttgtgttgttgatgtaggaataacagattcacagaccttaatt
cctgactctcagaaaaaacggattcattcaattatggatatactccagaggcaaggtctt
agacctattcctgaagcagaaattggattggcagttattttcattactacagagaattac
tgtgatcctcagggccagcccagtacaggattgaagacaacaactccaggtccaagcctt
tcccaagtcttaccagccaatgaaaacttaatgccaggtgccccagtgaatactacaaca
tatgtagctgatacacaatcagagcaaggaaataaatgtatgaatttgagtgaaaggcca
aaagaaatcaaaatcttcggaatggaacaaaagttcagaataccttcacaagaaacatcc
actgtgaaggaaccccacaaagtaaactctagtaataataatatagtatcaaatactctt
gttagtatgaaaatcccaaaatgtcagctttcaccaactaaattcccaggtgtaaataaa
agtggagattgggcttctcagcatcagcaaaccaactccatcaaaaactactttcagcca
tctaccaaaaaaagggaaagggatgaagaaaatcaagaaatgtctttatctaaatcagca
agaatagaaatgtcttgttctcttttagaacaaacacagcctactacatcctcagtatgg
aacaataaggagcagcagaatgagcctgtggaaagaaacccagataactcgtatgcagat
atagatttaaaatccactgtgaaaaattctgccaataaatctctctctacagaaaaacta
agatcagaaaaaagaaaagaaattgatgatttagccatagaaaatgaagtattggaacag
ttattgaagaatgcaaaaccagagttagaaattgaagtgaaagttcaaaaacaagaggaa
gatgtcaatattagaaaaaggccaagattggatatagaaacaaatggcccttgtaatgat
gaagcaataccagaaagtaacaaaatctctcaagaaaatgaaattgcgaagaattgtgag
ctcaagnaatcactctggtcaactaaagaactatctaacaatgatgaacttcagggtgat
ggtgagatgcttccaaagacggtgttactgactgaatttaggtcactggtggttcgtaac
tctacttccagaaatgcatccagtgtaaataatgattatggtgaactaaagaatttcaag
aaattcaaaaaggtcaaatttcctggagcaggaaaacttccacacatcattggaggatca
gatctaatagctcatcatacccgaaagactacagaattagaggagtggttgaggcaggaa
atggaggtgcaaaatcaacatgcaaaagaagaatctcttgccgatgaactctttagatac
aatcctaatataaaaaggagaagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system