KEGG   Orcinus orca (killer whale): 101280596
Entry
101280596         CDS       T05247                                 
Symbol
ITGB5
Name
(RefSeq) integrin beta-5 isoform X2
  KO
K06588  integrin beta 5
Organism
oor  Orcinus orca (killer whale)
Pathway
oor04145  Phagosome
oor04148  Efferocytosis
oor04151  PI3K-Akt signaling pathway
oor04510  Focal adhesion
oor04512  ECM-receptor interaction
oor04810  Regulation of actin cytoskeleton
oor04820  Cytoskeleton in muscle cells
oor05165  Human papillomavirus infection
oor05205  Proteoglycans in cancer
oor05410  Hypertrophic cardiomyopathy
oor05412  Arrhythmogenic right ventricular cardiomyopathy
oor05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:oor00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    101280596 (ITGB5)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101280596 (ITGB5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    101280596 (ITGB5)
   04148 Efferocytosis
    101280596 (ITGB5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101280596 (ITGB5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101280596 (ITGB5)
   04810 Regulation of actin cytoskeleton
    101280596 (ITGB5)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    101280596 (ITGB5)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    101280596 (ITGB5)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    101280596 (ITGB5)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    101280596 (ITGB5)
   05414 Dilated cardiomyopathy
    101280596 (ITGB5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oor04131]
    101280596 (ITGB5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oor04515]
    101280596 (ITGB5)
Membrane trafficking [BR:oor04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    101280596 (ITGB5)
Cell adhesion molecules [BR:oor04515]
 Integrins
  Integrin beta subunits
   101280596 (ITGB5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt PSI_integrin EGF_2 I-EGF_1 DUF2975
Other DBs
NCBI-GeneID: 101280596
NCBI-ProteinID: XP_004278863
Position
5:79005607..79128572
AA seq 800 aa
MPRAPAPLYACLLGLCTLVPRLPGLNICTSGSATSCEECLLIHPKCAWCSKEDFGSLRSV
TSRCDFKANLVRNGCGGEFESPVSSTQVLRSLPLSSKGSSPAGSDVIQMTPQEVTVNLRP
GDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG
SFVDKNISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
RNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL
HGNSKNIIQLIINAYNSIRSKVELSVWDQPEDINLFFTATCQDGVSYPGQRKCEGLKIGD
TASFEVSVEARSCPGKHAQPMFTLRPVGFRDSLEVGVTYDCRCSCSAGLEPDSTRCSGNG
TYVCGLCECNPSYLGTRCECQEGESQSGYQNLCREAEGKPLCSGRGQCSCNQCACFESEF
GKIYGPFCECDNFSCARNKGVLCSGHGDCHCGECKCHAGYIGDNCNCSTDISTCQARDGQ
ICSDRGHCVCGQCQCTEPGAFGETCEKCPTCLDACSTKRDCVECLLLHSGSSADNQTCQN
LCKDEVITRVDTIVKDDQEAVLCFYKTAKDCVMMFTYAELPSGKSNLTVLREPECGSAPN
AMTILLAVVGSIILIGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIS
THTVDFTFNKFNKSYNGTVD
NT seq 2403 nt   +upstreamnt  +downstreamnt
atgccgcgggcccccgcgcccctgtacgcctgcctcctcgggctctgtacgctcgtgccc
cggctcccaggtctcaacatatgcactagtggaagtgccacctcttgtgaagaatgtctg
ctaatccacccaaaatgtgcctggtgctccaaagaggacttcggcagcctgcggtcggtc
acctcccggtgcgacttcaaggcaaacctggtcaggaacggctgtggcggcgagtttgag
agtccggtcagcagcacccaggtccttcggagcctgcctctcagcagcaagggctccagc
cccgcggggtcagacgtcatccagatgacgccgcaggaggtcacggtgaacctgcggccc
ggtgacaagactaccttccagctgcaggttcgacaggtggaggattatccagtggacttg
tactacctgatggacctctctctgtccatgaaggatgacttggacaacatacggagcctg
ggcaccaagcttgccgaggagatgaggaagctcaccagcaacttccgcttggggtttggg
tcttttgtagacaagaacatctctcctttctcctacacggcaccgaggtaccagaccaac
ccgtgcattggttacaagctattcccaaactgtgtcccctcctttgggttccgccatctg
ctgcctctcacagacagagtggacagcttcaacgaggaagttcggaagcagagggtgtcc
cggaaccgcgatgcccccgagggcggctttgacgcagtgctccaggcggctgtctgcaag
gagaagatcggctggcgaaaggacgcgctgcacctgctggtgttcacaacggacgacgtg
ccccacatcgcgctggacggaaagctggggggcctggtgcagcctcacgacggccagtgc
cacctgaatgaggccaacgagtacactgcctccaaccagatggactatccatcccttgcc
ttgcttggagagaaattggcagaaaacaacatcaacctcatctttgcagtgacaaagaac
cattatatgctctacaagaattttacagccctgatacctggaacaacggtggagatatta
cacggaaactccaaaaatataattcaactgattatcaatgcatacaacagcatccggtct
aaagtggagctgtccgtctgggatcagcctgaggatatcaatctctttttcactgctacc
tgccaggacggtgtatcttaccctggtcagaggaagtgtgaaggcctgaagatcggggac
acagcatcctttgaggtgtcagtggaggcccggagctgcccgggcaaacacgcgcagccc
atgttcaccctgcggcccgtgggattccgggacagcctggaggtgggggtcacctacgac
tgcaggtgcagctgcagcgcaggactggagccggacagcaccagatgcagcggcaacggg
acttacgtctgcggcctgtgtgagtgcaaccccagctacctgggcaccaggtgcgagtgc
caggaaggggagagccagagcgggtaccagaacttgtgccgagaagcggagggcaagccc
ctgtgcagcggacgcgggcagtgcagctgcaaccagtgcgcctgcttcgagagcgagttt
gggaagatctacgggcccttctgcgagtgcgacaacttctcctgtgccaggaacaaagga
gtcctctgctcaggccatggcgactgtcactgcggagaatgcaaatgccacgcaggttac
atcggggacaactgtaactgctcgacagacatcagtacgtgccaggccagggatggccag
atctgcagtgaccgcgggcactgtgtctgtgggcagtgccagtgcacggagccaggggcc
tttggggagacgtgtgagaagtgcccgacctgcctggatgcttgcagcaccaagagagac
tgtgttgagtgcttgctgcttcactcagggagctcagctgacaaccagacctgccagaac
ctgtgcaaggatgaggtgatcacacgggtggacaccatcgtgaaagatgaccaggaggct
gtgctttgtttctacaaaactgccaaggattgtgtgatgatgttcacgtatgcagagctc
cccagtgggaagtccaacttgacagtcctcagggagccagagtgtggaagtgcccccaat
gccatgaccatcctcctggccgtggtcggcagcatcatcctgatcgggcttgcgctcctg
gccatctggaagttgcttgtcaccatccacgaccggagagagtttgcgaagttccagagt
gagcgatccagggcccgctatgaaatggcttcaaaccctctgtacagaaagcccatctcc
acgcacaccgtggatttcaccttcaacaagttcaacaaatcctacaatggaacagtggac
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (12)   
   KEGG PATHWAY (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (7)   
   Pfam (7)   
All databases (52)   

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