KEGG   Orcinus orca (killer whale): 101285270
Entry
101285270         CDS       T05247                                 
Symbol
RBCK1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X2
  KO
K10630  RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:2.3.2.31]
Organism
oor  Orcinus orca (killer whale)
Pathway
oor04217  Necroptosis
oor04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:oor00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    101285270 (RBCK1)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    101285270 (RBCK1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oor04121]
    101285270 (RBCK1)
Enzymes [BR:oor01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     101285270 (RBCK1)
Ubiquitin system [BR:oor04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    101285270 (RBCK1)
  Multi subunit Ring-finger type E3
   LUBAC complex
    101285270 (RBCK1)
SSDB
Motif
Pfam: zf-RING_UBOX zf-RING_2 IBR zf-C3HC4_2 zf-RING_5 zf-C3HC4 zf-RanBP zf-RING_11 zf-C3HC4_4 ubiquitin
Other DBs
NCBI-GeneID: 101285270
NCBI-ProteinID: XP_004272726
Position
16:28069634..28088377
AA seq 510 aa
MDEKIKKAEEVAQRLTRAVAGGDEQVAMQCAIWLAEQRVPLNVQLKPEVSLTQDIRLWVS
VEDAQLHTVTIWLTVRPDMTVASLKDMVFLDYGFPPTLQQWVIGQRLARDQETLHSHGVR
RNGASAYLYLLSACNTSLNPQELQRERQLRMLEDLGFKDLTLQPRGPLEPVLPKPGGPQE
PGRGQNDAAPEPPPVGWQCPGCTFINKPTRPGCEMCCRARPEAYQVPASYQPDEEERARL
AGEEEALRQYQQRKQQQQEGNYLQHVQLDQRSLVLNTEPTECPVCYSVLAPGEAVVLREC
LHTFCRECLQGTIRNSQEAEVACPFIDNTYSCSGKLLEREIRALLSPEDYQRFLDLGISI
AENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHINCLLCKAIHEQMNCKEYQDDLAL
RAQNDVAAWQTTEMLRTMLQQGEAMHCPQCQIVVQKKDGCDWIRCTVCHTEICWVTKGPR
WGPGGPGDTSGGCRCRVNGSPCHPSCQNCH
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggacgagaagatcaagaaagctgaggaggtggcccagagactcacccgagcagtggct
ggcggggatgaacaggtggctatgcagtgtgccatatggctggcagagcaacgggtgccc
ctgaacgtgcaactgaagcctgaggtctccctgacacaggatatcaggctgtgggtgagc
gtggaggatgcgcagttgcacacggtcactatctggctcacggtgcggcctgacatgacg
gtggcctccctcaaggacatggtgttcctggactatggctttccgccaaccctgcagcag
tgggtgattgggcagcgcttggcccgggaccaggagaccctgcactcccacggggtgcgg
cggaacggggccagtgcctacctctatctgctgtcagcctgcaacacctcactcaaccct
caggagctgcagcgggagcggcagctgcggatgctggaggatctgggcttcaaggacctc
acgctgcagccacggggccccctggaaccagtcctcccgaagcccgggggcccccaggag
ccggggcgggggcagaacgacgccgcgccagagcccccgccggtgggctggcagtgccct
ggctgcactttcatcaacaagcccacgcggcccggctgcgagatgtgctgccgggcgcgg
cccgaggcctaccaggtccctgcctcgtaccagccggacgaggaggagcgagcgcgtctg
gccggtgaggaggaggcgctgcgccagtaccagcagcggaagcagcagcagcaggagggg
aactacctacagcacgtgcaactggatcagcggagcctggtgctgaacaccgagcctacc
gagtgtcccgtatgctactcggtgctggcgcccggcgaggccgtggtgctgcgtgagtgt
ctgcacaccttctgcagggagtgtctacagggcaccatccgcaacagccaggaggctgag
gttgcctgccccttcattgacaacacctactcatgctcgggcaagctgctggagagggag
atccgggcgctcctgagccctgaggattaccagcgatttctggacctgggcatctccatt
gcagaaaaccgcagtgccttcagctaccactgcaagaccccggactgcaaaggatggtgc
ttctttgaggatgacgtcaacgagttcacctgccctgtgtgtttccacatcaactgcctg
ctttgcaaggccatccacgagcagatgaactgcaaggagtaccaagacgacctggccctg
cgggctcagaacgatgtggctgcctggcagacgacggagatgctgaggaccatgctgcag
cagggcgaggccatgcactgcccacagtgccagatcgtggtgcagaagaaggatggctgt
gactggatccgctgcactgtctgccacaccgagatctgctgggtcaccaagggtcctcgc
tggggccccgggggcccgggagacaccagcgggggctgccgctgccgggtgaatgggtct
ccttgccaccccagctgtcagaactgccactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (36)   

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