KEGG   Orcinus orca (killer whale): 101286529
Entry
101286529         CDS       T05247                                 
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes protein 1A isoform X1
  KO
K06636  structural maintenance of chromosome 1
Organism
oor  Orcinus orca (killer whale)
Pathway
oor04110  Cell cycle
oor04114  Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:oor00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    101286529 (SMC1A)
   04114 Oocyte meiosis
    101286529 (SMC1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oor03036]
    101286529 (SMC1A)
Chromosome and associated proteins [BR:oor03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    101286529 (SMC1A)
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    101286529 (SMC1A)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_23 AAA_15 AAA_21 AAA_29 ABC_tran Mce4_CUP1
Other DBs
NCBI-GeneID: 101286529
NCBI-ProteinID: XP_004286340
Position
X:complement(47088160..47120342)
AA seq 1233 aa
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE
DSVSGSQRTSNIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNSCFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq 3702 nt   +upstreamnt  +downstreamnt
atgggtttcctgaagctgattgagatcgagaactttaagtcgtacaagggtcggcagatt
atcggaccatttcagaggttcaccgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgccatcagctttgtgttgggtgagaaaaccagcaacctgcgggtaaagacc
ctgagggacctgatccatggagctcctgtgggcaagccagctgccaaccgggcctttgtc
agcatggtctactctgaggagggtgctgaggaccgcacctttgcccgtgtcattgttggg
ggttcctctgagtacaagatcaacaacaaagtggtccagctacatgagtacagtgaggaa
ttagagaagttgggcattcttatcaaagctcgtaacttcctcgtcttccagggcgctgtg
gaatctattgccatgaagaaccccaaagagaggacagctctttttgaagagatcagtcgc
tctggggagctggcccaggaatatgacaagcgaaaaaaggaaatggtgaaagctgaagag
gacacgcagtttaattaccatcgcaaaaaaaacatcgcagctgaacgcaaggaggccaaa
caagaaaaagaagaggctgaccgctaccagcgcctgaaggatgaggtggtgcgagctcag
gtacagttgcaacttttcaaactttatcataatgaagtggaaatcgagaaactcaacaaa
gaactggcctctaagaacaaggagatcgagaaggacaagaagcggatggacaaggtagag
gatgagctgaaggagaagaagaaggagctgggcaaaatgatgcgggaacagcagcagatt
gagaaggagatcaaggagaaggactcagagctgaaccagaagcggcctcagtacatcaaa
gccaaggagaatacctcccacaaaatcaagaagctggaagcagccaagaagtccctacag
aatgctcagaagcattacaagaagcgtaaaggtgacatggatgagctggaaaaggagatg
ctgtcagtggagaaagcccggcaggagtttgaggaacggatggaagaggagagtcagagt
cagggcagagatttgaccctggaggagaatcaggtgaagaaataccaccggttgaaagaa
gaagccagcaagagagcagctaccctggcgcaggagcttgagaagttcaatcgagaccag
aaggccgaccaggaccggctggatctggaagagcggaagaaagtagagacagaggccaag
atcaagcaaaagctgagggagattgaagagaatcagaagcggattgagaaactggaggaa
tacatcacaactagcaagcagtccctcgaggagcagaagaagctagagggggagctgaca
gaggaggtggagatggccaagcggcgaattgatgagatcaataaggagctgaaccaggtg
atggagcagctgggggatgcacgcattgaccgccaggagagcagccgccaacagcgtaag
gcagaaattatggaaagcatcaagcgcctgtaccctggctctgtgtacggccgcctcatt
gacctctgccaacccacacaaaagaagtatcagattgcagtaaccaaggttttgggtaag
aacatggatgccattatcgtggactcagagaagacaggccgggactgtattcagtatatc
aaggagcagcgtggggagcctgagaccttcttgcctcttgattacctggaggtgaaacct
acagatgagaaactccgggagctgaagggggccaagctggtgattgacgttattcgctat
gagccacctcacatcaaaaaggccctgcagtacgcttgtggcaatgcccttgtctgtgac
aatgtggaggatgcccgccgcattgcctttggaggccaccagcgccacaagacagtggca
ctggatgggaccctgttccagaagtcaggggtgatctctggcggggctagtgatctgaag
gccaaggcccggcgctgggatgagaaagcagtagacaagttgaaagagaagaaagagcgg
ttgacagaagagctgaaggagcagatgaaggcaaagcggaaagaggcagaactacgtcag
gtgcagtctcaggcccacggactgcagatgcggctcaagtactcacagagtgacctagaa
cagaccaagacacgacatctggccctgaatctgcaggaaaagtccaagctggagagtgag
ctagccaactttgggcctcgaatcaatgatatcaagaggatcatccagagtcgagagagg
gaaatgaaagacttgaaggagaagatgaaccaggtagaggatgaggtatttgaagagttt
tgtcgggagattggtgtgcgcaacatccgggagtttgaggaagagaaggtgaagcggcag
aatgaaatcgccaagaagcgtttggagttcgagaatcagaagactcgcttgggcatccaa
ttggattttgaaaagaaccaactgaaggaggaccaggataaagtacacatgtgggagcag
acagtgaaaaaagatgaaaatgagatagaaaagctcaaaaaggaggaacaaagacacatg
aagatcatagatgagaccatggcccagctacaagacctgaagaatcagcacctggccaag
aagtcagaggtgaatgacaagaaccatgagatggaggagattcgtaagaaactggggggc
gccaacaaggaaatgacccatttacagaaggaggtgacagccattgagaccaagcttgaa
cagaaacgcagtgaccgccacaatctgctacaggcctgcaagatgcaggacatcaagttg
ccactgtctaagggcaccatggacgatattagtcaggaagagggtagctcccagggggag
gattcagtgagtggctcccaacgaacttccaatatctatgcacgagaggccctcatcgag
attgactacggcgacctgtgtgaggatctgaaggatgcccaggccgaggaggagatcaag
caggagatgaacacactgcagcagaagctgaatgagcagcagagtgtgctccagcgtatt
gctgcccccaacatgaaggccatggaaaagctggaaagtgtccgagacaagttccaggaa
acctcagacgagtttgaggcagcccgaaagcgagccaagaaggccaaacaggcatttgaa
cagatcaagaaggaacgctttgaccgcttcaattcctgttttgaatcagtggccaccaac
attgatgagatctacaaggccctgtcccgtaacagcagtgcccaggcattcctgggccct
gagaaccctgaggagccctacttggatggcatcaactacaactgtgtagctcctggcaaa
cgcttccggcccatggacaacttgtcagggggggaaaaaacagtagcagctctggcactg
ctctttgccatccacagctacaagccagcccccttcttcgtcctggatgagatagatgct
gccctggataacaccaacattggcaaggtagcaaattacatcaaggagcagtcgacttgc
aacttccaggccatcgtcatttctctcaaggaggagttctacaccaaggctgagagcctc
attggagtctaccccgagcaaggggactgtgtgatcagcaaagtcctgaccttcgacctc
accaagtacccagatgccaaccccaaccccaatgagcagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (8)   
   Pfam (8)   
All databases (53)   

Download RDF
DBGET integrated database retrieval system