KEGG   Orcinus orca (killer whale): 101287882
Entry
101287882         CDS       T05247                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DO beta chain isoform X1
  KO
K06752  MHC class II antigen
Organism
oor  Orcinus orca (killer whale)
Pathway
oor04145  Phagosome
oor04514  Cell adhesion molecules
oor04612  Antigen processing and presentation
oor04640  Hematopoietic cell lineage
oor04658  Th1 and Th2 cell differentiation
oor04659  Th17 cell differentiation
oor04672  Intestinal immune network for IgA production
oor04940  Type I diabetes mellitus
oor05140  Leishmaniasis
oor05145  Toxoplasmosis
oor05150  Staphylococcus aureus infection
oor05152  Tuberculosis
oor05164  Influenza A
oor05166  Human T-cell leukemia virus 1 infection
oor05168  Herpes simplex virus 1 infection
oor05169  Epstein-Barr virus infection
oor05310  Asthma
oor05320  Autoimmune thyroid disease
oor05321  Inflammatory bowel disease
oor05322  Systemic lupus erythematosus
oor05323  Rheumatoid arthritis
oor05330  Allograft rejection
oor05332  Graft-versus-host disease
oor05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:oor00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    101287882
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    101287882
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    101287882
   04612 Antigen processing and presentation
    101287882
   04658 Th1 and Th2 cell differentiation
    101287882
   04659 Th17 cell differentiation
    101287882
   04672 Intestinal immune network for IgA production
    101287882
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    101287882
   05164 Influenza A
    101287882
   05168 Herpes simplex virus 1 infection
    101287882
   05169 Epstein-Barr virus infection
    101287882
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    101287882
   05152 Tuberculosis
    101287882
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    101287882
   05140 Leishmaniasis
    101287882
  09163 Immune disease
   05310 Asthma
    101287882
   05322 Systemic lupus erythematosus
    101287882
   05323 Rheumatoid arthritis
    101287882
   05320 Autoimmune thyroid disease
    101287882
   05321 Inflammatory bowel disease
    101287882
   05330 Allograft rejection
    101287882
   05332 Graft-versus-host disease
    101287882
  09166 Cardiovascular disease
   05416 Viral myocarditis
    101287882
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    101287882
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oor04147]
    101287882
Exosome [BR:oor04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101287882
  Exosomal proteins of epithelial cells
   101287882
  Exosomal proteins of breast milk
   101287882
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 ig C2-set_2 Ig_2 DUF3040
Other DBs
NCBI-GeneID: 101287882
NCBI-ProteinID: XP_004267859
Position
10:complement(65340789..65357801)
AA seq 265 aa
MGSSWVPWVVALLVTVVRLDSSMTQGRDAPEDFVIQAKADCYFTNGTENVQFVVRFIFNL
EEYARFDSNLGMFVALTELGQPDAELWNNRPDILARSRASVDALCRHNYKLGAPFTVGRK
VQPEVTVYPERIPALQHHNLLLCSVTGFYPGDIKITWFRNGQEQREGVMSTGLIRNGDWT
FQTMVMLAMTPELGEVYTCLVDHPSLLSPVSVEWRAQSEYPWRKMLSGIAAFLVGLVFLL
VGIVIHTRARKGPKSSSSSTATLRS
NT seq 798 nt   +upstreamnt  +downstreamnt
atgggttctagctgggttccctgggtggtggctttgttagtgacggtagtcaggctggat
tcctccatgactcaaggcagagatgctccagaagattttgtgattcaggcaaaggctgac
tgttacttcaccaatgggacagaaaatgtgcagtttgtggtcagattcatctttaacctg
gaggagtatgcacgttttgacagcaacttggggatgtttgtggccttgacggagctgggc
cagcctgacgctgagctgtggaacaatcggcccgatatactggcaaggagtagagcctct
gtggatgcgctctgcagacacaactacaagctgggtgcacccttcactgtggggagaaaa
gtgcaaccagaggtgacagtgtatccagagaggatcccagccttgcagcaccacaatctg
ctgctttgctctgtgacaggtttctatccaggggacatcaagatcacgtggttccggaat
gggcaggaacagagagagggggtcatgtccactggcctcattaggaatggagactggacc
tttcagacaatggtgatgctggcaatgactcctgaacttggagaggtctacacctgcctt
gttgatcatcccagcctgctgagccctgtttctgtggagtggagagctcagtctgaatat
ccttggagaaagatgctgagtggaattgcagccttcctggttgggctagtcttccttctg
gtggggatcgtcatccacaccagggctcggaaaggtcccaagagcagttcttcgtccaca
gccacattaaggtcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (24)   
   KEGG PATHWAY (24)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (44)   

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