KEGG T01369: Ocepr

Oceanithermus profundus: Ocepr_0915

Entry

Ocepr_0915 CDS T01369

Definition

DNA ligase i, ATP-dependent dnl1

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

opr Oceanithermus profundus

Pathway

opr03030	DNA replication
opr03410	Base excision repair
opr03420	Nucleotide excision repair
opr03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:opr03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:opr03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:opr03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:opr03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_OB_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

930355..932070

AA seq 571 aa
MTFQRFVATLLEVERASSRIAMVKMLAEAFRELPPEEVPLAVLLLQGRVAPEFEGLEFGV
AEKEAAKALALALGRDEAETVQAVKEKGDIGAYALEVLPRRAGGLSLRHVYGELRAIAED
AGPGSQARKRERLSRLVAEASPEEAAVILRTVTGRLRLGVGDATVLEALALAFLGDRAKK
PLLERAYNLTSDLAYVARLALEGEEALRQVKLEVGKPVRMMLAERLPGPEQIMEKLGPHF
AEHKYDGERVQVHFDGERFWVYSRRLENITHQYPDLLEALREVQHGPFILEAEAVVTDPV
TGEMRPFQNVLNRKVKHLTPELLEKYPIKGFVFELLYADGEVLIERPYSERRERLERWFR
PHERLELSTKRFVETTEELVQFFDASIEAGCEGLVCKKPDGDYEAGKRGFKWVKYKRGIA
GKLSDTLDLVIVGAWLGRGRRAGTYGSLLAAAYNPDEDRFETLTKVGSGFSDEDLNEVLP
RRLDPYRRGERHPRVWSLLEPDVWFEPVQVIEVEAQEITLSPNHTCAFGAVQEGRGLALR
FPRFVRYRDDKSPEEATTTKEVVEMYKNQWA

NT seq 1716 nt +upstreamnt +downstreamnt
atgaccttccagcggttcgtcgcgacgctgctcgaggtggaacgggcgagctcgcggatc
gccatggtgaagatgctggccgaagccttccgcgagcttccgcccgaggaggtgccgctt
gcggtgctgctccttcaaggtcgggtggcccccgaattcgaggggctcgagttcggcgtg
gctgagaaggaggcggccaaggcgttggcgctggcgctggggcgggacgaagcggagacc
gtccaggccgtcaaggagaagggcgacatcggcgcctatgcgctcgaggtgctgccccgc
agggccggaggtttgtccttgcggcacgtctacggcgagctgcgcgccatcgccgaggac
gccggtcccggttcccaggcgcgcaagcgcgagcgcctgtcgcgcctcgtcgccgaggcc
agccccgaggaggcggcggtgatcctgcgcaccgtgaccgggcggctgcgcctgggggtg
ggcgacgccacggtgctggaggccctggcgctggccttcctgggcgaccgcgccaagaag
ccgctcttggagcgggcctacaacctgacctccgacctggcctacgtggcgcggctggcc
ctggagggtgaagaggcattgcggcaggtgaagctcgaggtgggcaagccggtgcggatg
atgctggccgaacggctgccgggccccgagcagatcatggagaagctgggcccccacttc
gccgagcacaagtacgacggcgagcgggtgcaggtgcacttcgacggcgagcgcttctgg
gtctactcgcgccggctcgagaacattacccaccagtaccccgacctgctggaggcgctg
cgcgaggtgcagcacggacccttcatcctcgaggccgaggcggtggtcaccgacccggtg
accggcgagatgcgcccattccagaacgtgctcaaccgcaaggttaagcacctgacgccc
gagcttctggagaagtaccccatcaagggcttcgtcttcgagctgctctacgcggacggc
gaggtcttgatcgagcgcccctacagcgaacggcgcgagcggctcgagcgctggttccgc
ccccacgagcggctcgagctttccaccaagcgcttcgtcgagacgaccgaggagctggtc
cagttcttcgacgcctccatcgaggccggttgcgaggggctggtctgcaagaagcccgac
ggcgactacgaagccggcaagcgcggcttcaagtgggtcaagtacaagcgcggcatcgcc
ggcaagctctccgacaccctcgacctggtcatcgtcggcgcctggttggggcgggggcgg
cgcgccggcacctacggctcgctgctggccgcggcctacaaccccgatgaagaccgcttc
gagaccctcaccaaggtgggttcggggttcagcgacgaggacctgaacgaggtgctgccc
cggcggctcgacccctaccgccgcggggagcggcacccgcgcgtctggtcgctgctcgag
cccgacgtctggttcgagcccgtccaggtcatcgaggtcgaggcccaggagatcacgctc
agccccaaccacacctgcgccttcggtgcggtccaggaaggccgcggcctggccctgcgg
ttcccccgcttcgtccgttaccgcgacgacaagagtcccgaggaggcgaccaccacgaag
gaagtggtggagatgtacaagaaccagtgggcttag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-OPR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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