KEGG   Oceanithermus profundus: Ocepr_1356Help
Entry
Ocepr_1356        CDS       T01369                                 

Definition
DNA-(apurinic or apyrimidinic site) lyase; formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
opr  Oceanithermus profundus
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:opr00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Ocepr_1356
Enzymes [BR:opr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Ocepr_1356
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Ocepr_1356
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(1395462..1396259)
Genome map
AA seq 265 aa AA seqDB search
MPELPEVETVRRMLAPVVTGRRLLGLEHDDPARYAAAEAAVGRRVHALRRRGKYLIFALT
GGLELVVHLGMSGSLRLDEGTHTRARLEFEGVTVFFNDPRRFGKLRAVPAGDYRVLPTLA
RMGPEPLTRGFTARAFAARLARTARPLKPALLSQEPVAGLGNIYADEALWKARLHPARPA
NALAPDEVRRLHRAVRAVLRRAVERGGSTLGDGAYTRPDGEPGYFQIEHAVYGRAGEACP
RCGRTIERLVLGGRSTHVCPRCQRR
NT seq 798 nt NT seq  +upstreamnt  +downstreamnt
atgccggaactgcccgaggtggaaaccgtccggcgcatgctggcgccggtggtgacgggc
cggaggctgctgggcctcgagcacgacgacccggcccgctacgccgcggccgaggcggcg
gtggggcggcgggtgcacgccctgcgccgccgcggcaagtacttgatcttcgcgctcacc
ggcgggctcgagctcgtggtgcacctggggatgagcggcagcctgcggctggacgagggg
acgcacacccgcgcacggctcgagttcgagggcgtcaccgtcttcttcaacgacccgcgg
cgtttcggcaaactgcgggcggtgcccgcgggcgactaccgggtgctgcccacgctcgcg
cgcatgggcccggagccgcttacgcgcggcttcacggcacgcgccttcgccgctcgcctg
gcgcgcacggcgcgcccgctcaagccggcgctgctgagccaggaaccggtggcggggctg
ggcaacatctacgccgacgaggcgctgtggaaggcgcggcttcaccccgcgcgcccggcg
aacgcactcgcgcccgacgaggtgcggcggctccaccgcgcggtgcgcgcggtgctgcgc
cgggccgtcgagcggggcggttcgacgctgggcgacggcgcctacacgaggcccgacggc
gagcccggctacttccagatcgagcacgcggtctacggccgcgccggcgaggcctgcccg
cgctgcggccggacgatcgagcgcctcgtcctcggcggccgctccacccacgtctgcccg
cgctgccagcggcgttag

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