KEGG   Ornithobacterium rhinotracheale DSM 15997: Ornrh_0556
Entry
Ornrh_0556        CDS       T02145                                 
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
orh  Ornithobacterium rhinotracheale DSM 15997
Brite
KEGG Orthology (KO) [BR:orh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:orh03009]
    Ornrh_0556
Enzymes [BR:orh01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Ornrh_0556
Ribosome biogenesis [BR:orh03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Ornrh_0556
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 Met_10 Methyltransf_25 TRAM MTS Cons_hypoth95 Methyltransf_15 Methyltransf_11 PrmA PCMT UPF0020 N6_N4_Mtase Methyltransf_12 RrnaAD FtsJ Methyltransf_4 Methyltransf_2
Other DBs
NCBI-ProteinID: AFL96757
UniProt: I3ZYH3
Position
577002..578417
AA seq 471 aa
MAKKERKPLILENIYLETAGAKGASIGKAPDGKTIFVRNAVPGDTVDVRILKKKRRYMEG
TAVFVQEYSEFRTEPECEHFGVCGGCKWQNMKYVAQLHYKEKEVYDHLTRIGGIEIDGGA
QKILGSKEKYFYRNKLEFSFSNQRWITEDEIAQNKEITDRNALGFHIPGMWSKILDVKKC
WLQRDPSNAIRLAIKDYAEKHNLAFFDPVKQEGFLRTLMIRTTTTGEVMVLIQFFEENKS
ERENLLNHILEQFPSITSLLYAINPKGNDSVYDLDIKTFAGQDFITEKMEDLHFKIGPKS
FYQTNPEQAYELYKVARDFAGLTGEELVYDLYTGTGTIAQFVSKKAKKVVGIESVPEAIA
AAKENAAANGIENCTFYCGDMKDVFTDEFVTQNGTPDIIITDPPRDGMHPKVVENILRIA
PKRVVYVSCNSATQARDLALMKEQYKVVKIQPVDMFPQTYHVENVVLLEKI
NT seq 1416 nt   +upstreamnt  +downstreamnt
atggcaaagaaagaaagaaaacctttaatcttagaaaatatttatcttgaaacagctggt
gccaagggcgcaagcataggaaaagcacccgatggcaaaacaattttcgtgcgaaacgcc
gtgcctggcgacaccgtagatgtgcgcattttaaagaaaaaacgccgctatatggaaggc
accgctgtatttgttcaagaatactccgagtttaggacagagcccgagtgtgagcacttt
ggcgtgtgcggtgggtgcaaatggcaaaacatgaaatatgtggctcagctacattataag
gaaaaagaagtttacgatcaccttacccgcattggtggcatcgaaatagacggaggggct
cagaaaattttaggctcaaaggaaaagtatttttatagaaataaattagaattttctttc
tccaatcaacgatggatcaccgaagacgaaatcgctcaaaacaaagaaatcaccgataga
aatgcactaggatttcacatccctggtatgtggagcaagatccttgatgttaaaaaatgc
tggctacaaagagacccgtccaatgcgattcgcttggcgattaaagattatgccgaaaaa
cataatttagccttttttgatcccgtgaaacaagaaggctttttacgcacgcttatgatt
cgcaccaccacaacgggcgaagttatggtattaattcagttttttgaagaaaataaatcc
gaacgagaaaatctattaaatcatattttagagcaattcccatcaatcacgagtttgctc
tacgccatcaatccaaaaggcaatgattcggtatatgatttagacattaaaacttttgca
ggacaagatttcattactgaaaaaatggaagatttgcattttaaaatcggtccaaaaagt
ttttaccaaaccaatcctgaacaagcctacgaattgtataaagtagcacgcgactttgct
ggactcacgggcgaagagcttgtttatgacttatatacaggcacaggaaccattgcacaa
tttgtatctaaaaaagctaaaaaagtagtgggcatagaatcggtgcccgaagccattgct
gctgccaaagaaaatgccgctgccaatggaattgaaaactgcaccttctattgtggcgat
atgaaagatgtttttaccgatgaatttgtaacacaaaacggaacgccagacatcatcatc
accgaccctccacgagatggcatgcaccctaaagtagtagaaaacattttgcgcattgcc
cctaaacgcgtggtgtatgtgagctgtaactctgccacccaagcgagagatttagccttg
atgaaagagcaatataaagtcgtaaaaattcagccagtggacatgttcccacagacttat
catgtggagaatgttgtacttttagaaaaaatttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (47)   

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