KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4330262
Entry
4330262           CDS       T01015                                 
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:osa03016]
    4330262
Enzymes [BR:osa01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     4330262
Transfer RNA biogenesis [BR:osa03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    4330262
 Prokaryotic type
    4330262
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 4330262
NCBI-ProteinID: XP_015623142
UniProt: Q6ET86 Q6ESS0
Position
2:27134462..27136740
AA seq 581 aa
MAAASPPASPPHPKRRKMSSSSDPDQEPTSPSAAGADGAQPRAPRYKRRKVAILLGYCGA
GYQGMQKNPGARTIEGDLEEALYRAGAVPEADRAAPRRYDWARAARTDKGVSAAAQVVSG
RFYVDPPVFTDRLNAQLAPQIRAFGYVRVTNSFNAKKFCDRRRYVYLLPVFALDPSAHPD
REAVMASVGSGSELTKCLECSERGRKVPGVMGREGKVPDPALQEEKSVEASREEAAVGSN
EDANCDPASTGDRSVDLPIPDNETNTQITEMRSNGAEKCDVQLSGGTLCSEAVPASNSET
VCPILNSDSNTNSDSVDVDPSFVAEKKGSIETVVTEDGKKQAMDVVTEDEKKQDVDYEGS
SLEEMPLRSAFSYTHEVKERFNRILKKYVGTHNFHNFTTRTKAEDPAAKRFIISFAADRV
VNLDGIDFIRCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESIYDVAFRKDVNLNVPTAPE
VGLYLDECMFTSYNKKWKDSHEAVSMEPYSEEAEEFKLKYIFPHIAAMEHKEGAVALWLH
SLNSRNYPDFRYMDNAGTEASIAAAVESVDEGTVPSDNISE
NT seq 1746 nt   +upstreamnt  +downstreamnt
atggccgccgcctcgccaccggcctccccgcctcaccccaagcgccgcaagatgtcctcc
tcctccgaccccgaccaggagcccacctcgccttccgccgctggcgccgacggcgcgcag
ccccgcgccccccggtacaagcgtcgcaaggtggccatcctgctcggctactgcggcgcg
gggtaccagggcatgcagaagaacccgggcgcgcgcaccatcgagggggacctggaggag
gcgctctaccgggccggcgccgtgcccgaggccgaccgcgccgcgccccgccgctacgac
tgggcccgcgcggcgcgcaccgacaagggcgtcagcgccgcggcgcaggtcgtctccggc
cgcttctacgtcgacccgcccgtcttcactgatcgcctgaatgcgcagctcgcgccccag
atccgcgccttcggctacgtccgcgtcaccaactcgttcaacgcgaagaagttctgcgac
cgccggaggtatgtgtacctgctgcccgtgttcgcgctcgaccccagcgcgcaccccgac
cgtgaggccgtcatggcgagcgttgggagtgggagcgagcttacgaagtgccttgagtgc
tcagagaggggtaggaaggtgcccggtgtcatgggccgggagggtaaggtacccgatcct
gcccttcaggaggagaaatctgttgaggcttcccgggaggaagctgcagtgggttcaaat
gaggatgcaaattgtgatcctgcaagcactggcgatcgtagtgttgatttacctatccct
gataatgaaaccaatacccaaatcactgaaatgagatcaaatggtgcagaaaaatgtgat
gttcaactgtcaggtggtactctctgttctgaagctgtaccagctagcaatagtgagact
gtttgccccatcctgaattcagattccaacacgaattcagattcagttgatgttgatcct
tcatttgtggctgaaaagaaaggtagtattgagactgttgttactgaagatggaaagaaa
caagctatggatgttgttactgaagatgaaaagaaacaagatgtggattatgaaggcagc
agtctagaagagatgcccctgagaagtgcattttcttacactcatgaagtcaaagagagg
tttaatagaattctcaaaaaatatgttggaacacacaatttccacaacttcaccaccaga
actaaagcggaggatcctgcagccaaaaggttcatcatttcctttgctgctgatcgtgta
gtgaatttggatgggattgattttatcaggtgcgaggttgttgggcagagtttcatgctc
catcagattaggaagatgattggccttgctgttgctgtgatgaggaactgtgctcctgag
tcaatctatgatgtagcgttccgcaaggatgtcaatcttaatgtgcctactgcgcctgag
gttgggctgtacttagatgaatgcatgttcacttcatataacaagaaatggaaggattca
catgaggcggtttctatggaaccttattctgaggaggctgaagagtttaagctcaagtat
atattccctcatatcgctgcaatggagcacaaggagggagctgtagctctctggttgcat
tcgttgaacagcagaaattatccagattttcgctacatggataatgctggaactgaggca
agtattgctgctgcagttgagagtgttgatgaagggacggtgccaagtgataatattagt
gagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

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