KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4337784
Entry
4337784           CDS       T01015                                 
Name
(RefSeq) probable ATP-dependent DNA helicase CHR12
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HDA2-3 ResIII SnAC DEAD QLQ SWI2_SNF2
Other DBs
NCBI-GeneID: 4337784
NCBI-ProteinID: XP_015640100
UniProt: Q60EX7
Position
5:complement(2548436..2559324)
AA seq 1128 aa
MAASVEAAAAAVVAPPASVGGDEVVVGGGGGGASEQARTLIGALNLLSRNLPLPPAVLHA
VSSIYHGGDAWEGEGEEGGEEEVAAAAAAVGDGCGESGEGEEDRADASPGADEGVTLIQE
LEDAVLKNQGPYMSYSELTALKEDRFNTSIQHRLTELEGLPSTRGEDLQMKCLLELYGLK
LLDLQKKVRTDISAEYWLHKKCAHPDRQLFDWGMMRIRYPFTMYGIGDSFSMDADDINRK
KRFSERISRLEEEEKNQAEIRKRKFFSEILNAAREYQLQVPASYKRKKQRNDGVLAWHVR
ARQRINRMEKSRLQVLKAGDQEAYLRMVEESKNERLKLLLGKTNELLEGIGKAVQRQKDA
EHVSRPDGSELPKGSESDDCSQISGLKVESPDEESPSDVDADHHSSADHSKFNAGHRLDS
TVHSIEEKVTEQPSALEGGELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALI
AYLLEKKEVTGPHLIIAPKAVLPNWSNEFKTWAPSIGTILYDGRPDDRKALREKNFGQRQ
FNVLLTHYDLILKDLKFLKKVHWHYLIVDEGHRLKNHECALARTLVSRYQIRRRLLLTGT
PIQNSLQELWSLLNFILPNIFNSSQNFEEWFNAPFACEVSLNDEEQLLIIHRLHQVLRPF
LLRRKKDEVEKYLPVKTQVILKCDMSAWQKAYYEQVTSNGRVSLGSGLKSKALQNLSMQL
RKCCNHPYLFVEHYNMYQRQEIVRSSGKFELLDRLLPKLQRAGHRVLLFSQMTKLLDILE
VYLQMYQFKYMRLDGSTKTEERGRLLADFNKKDSEYFLFLLSTRAGGLGLNLQTADTVII
FDSDWNPQMDQQAEDRAHRIGQKNEVRVFVLVSVGSIEEEILDRAKQKMGIDAKVIQAGL
FNTTSTAQDRRALLQEILRRGTSSLGTDIPSEREINRLAARNDEEFWLFEKMDEERRQRE
NYKPRLMEGIEVPDWVFANDTLTEKIPADEPQNVLLTTKRRRKEVVYSDSFGDQWMKADD
VVEETPRMAPRAKRSAYSSDVQEVDFSERRKRHKSLVNIADDASIPMWTPEKVRAGVSSY
SKDENEDDAEDESTTSVLQGGSFTWKTLRRKRSSHFSNSSDSKGRSAF
NT seq 3387 nt   +upstreamnt  +downstreamnt
atggctgcctcggtggaggcggcggcggcggcggtggtggccccgcccgcctccgtgggc
ggtgacgaggtcgtcgtcggcggcggcggcggcggggcgtcggagcaggccaggacgctc
atcggcgcgctcaacctgctctcccgcaacctcccgctgccgcccgccgtcctgcacgcc
gtctcgtccatctaccacggcggcgacgcgtgggagggggaaggggaggaggggggtgaa
gaggaggtggcggcggcggcggcggctgtcggggatggatgcggcgagagcggggagggg
gaggaggaccgcgcggatgcttctcccggtgcggatgagggagtcaccttgattcaagag
cttgaagatgctgtattgaagaatcaaggaccgtatatgtcatactcagagttgactgct
ttaaaagaagaccgcttcaacacttccattcagcataggctgactgaacttgaaggatta
ccatctactaggggtgaagatttgcaaatgaagtgtttgcttgaattgtacgggcttaag
ttattagacttgcagaagaaagtaaggactgatatcagtgcagaatactggctacacaaa
aaatgtgcacaccctgataggcaattgtttgactgggggatgatgcgtatacggtatcct
tttaccatgtatggaattggagatagtttttcaatggatgctgatgatatcaaccgcaaa
aagagattctcagagaggatctcaagacttgaagaggaggaaaagaaccaggcagagatc
aggaagaggaaatttttttcagaaattcttaatgctgctagggagtatcagctacaagta
ccggcttcttacaaacgaaaaaaacagcgcaatgatggagttctggcatggcatgttcgt
gcacgtcaacgtataaatcgcatggaaaagagtagattacaagttttgaaggctggtgac
caagaagcttatttgcgtatggttgaggagagcaagaacgagcgcctgaaactgctcctt
ggaaaaacaaatgagcttcttgaaggaatagggaaagctgtgcagagacaaaaagatgct
gagcatgttagtcgccctgatggatctgaactgccaaaagggtcagaatctgatgattgt
tctcaaatatcaggcctcaaggttgaatcccctgatgaagagtccccatcagatgttgat
gcagaccatcatagttctgctgatcatagtaaatttaatgctggccataggcttgattct
accgtccactctattgaagagaaggtaacggaacaaccatcagctcttgaaggtggggag
ttaagaccatatcaattagagggcctgcaatggatgctttctttattcaacaataatttg
aatggtattctggctgatgaaatgggtttggggaaaacaattcagaccatagctttgatc
gcctatctattggagaagaaggaggttacaggaccacacttaataatagcaccaaaggcc
gtgttaccaaattggtctaatgaattcaaaacttgggctcctagcattgggacaattctg
tatgatggtcgtccagatgataggaaggctctaagggaaaagaattttggacaacggcag
tttaatgttttgctcacgcactatgacttgatactgaaagatctgaagttcctgaagaag
gttcactggcattatctgatagttgatgaaggacatcgtttgaaaaaccatgaatgtgcg
cttgctcgcacactagtttctagatatcaaatccgtcgccgattacttttgactggcact
ccaatccaaaatagcctacaagagctgtggtctttgctgaactttattcttcccaatatt
tttaattcatcacagaattttgaggaatggtttaatgcaccatttgcatgtgaagtcagc
cttaatgatgaggaacagctgctaattatacatcgtttgcatcaagtgctgcgtccattt
ttgctgaggaggaagaaagatgaagtggaaaaatatcttcctgtgaaaacacaagtaata
ctcaagtgtgacatgtctgcttggcaaaaagcatactatgaacaagtcactagcaatgga
agggttagtctaggatctggactcaaatcaaaggctttgcaaaatctgtcgatgcaactt
agaaaatgttgcaatcatccctatctattcgttgagcattataacatgtatcaacggcag
gaaattgttagatcatcagggaagtttgaattgcttgaccggctacttccaaaattgcag
agagctggtcacagggttctgcttttctctcagatgacaaaactgcttgatatcttagaa
gtatatttgcaaatgtaccagttcaagtacatgaggcttgatggatctacgaagactgaa
gagcgagggagattattggcagattttaacaagaaggactcagaatatttcttgtttctt
ctcagcacccgagctggaggccttgggttgaacttgcagactgcagacactgttattatt
tttgacagtgactggaatcctcaaatggatcagcaggctgaagaccgtgcccaccgtatt
ggacaaaagaatgaagtgcgtgtattcgttcttgttagtgttggctcaattgaagaagag
atcttggaccgtgcaaaacagaagatgggtattgatgcaaaagttatccaggctgggctg
ttcaacacaacctccacagctcaggataggcgagcattgctgcaggagatcctgaggaga
ggaacaagctcactgggaactgatatccctagtgagcgtgaaataaatcgtttggctgct
cgtaatgatgaagaattctggttgtttgagaagatggatgaagaaaggcggcaaagagaa
aactacaaaccgaggctcatggagggaattgaggttccagactgggtgtttgccaatgat
actttaacagagaagatacctgcagatgaaccccagaatgttctgctaactacgaagaga
cgcaggaaagaggttgtctactcagactcttttggtgatcagtggatgaaagcagatgat
gtagttgaagagactccaaggatggctccaagagcaaagcggagcgcttattcgtctgat
gtacaagaagtcgatttcagtgagaggaggaaaaggcataaatctctagtgaacattgca
gatgatgccagcattccaatgtggacaccagaaaaagtaagggctggggtttcttcatat
agcaaggatgagaatgaagacgatgccgaagatgaatccaccacaagtgttttgcagggg
ggcagttttacatggaagacccttagaaggaaaaggtcaagccacttctccaattcctca
gattcaaaagggcgctcggcattctaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (52)   

Download RDF
DBGET integrated database retrieval system