| Entry |
|
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| Gene name |
bip110
|
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| Definition |
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23
|
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| KO |
| ubiquitin carboxyl-terminal hydrolase 36/42 [EC: 3.4.19.12] |
|
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| Organism |
osa Oryza sativa japonica (Japanese rice) (RefSeq)
|
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| Brite |
Enzymes [BR:osa01000]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
4340327 (bip110)
Peptidases [BR:osa01002]
Cysteine Peptidases
Family C19: ubiquitin-specific protease family
4340327 (bip110)
Ubiquitin system [BR:osa04121]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
4340327 (bip110)
 |
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| SSDB |
   |
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| Motif |
 |
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| Other DBs |
NCBI-GeneID: NCBI-ProteinID: UniProt: |
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| Position |
6
|
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| AA seq |
940 aa  
MAEVEVAAAAAAAEGVLHRRIEFHLARRSHSVVAVGGGGFRMETLNPDAGDRAAAGAAQG
VGVAAGGEGEARRAEKGEVVGGGLDPELSVARIYLGRIGAGLQNLGNTCYLNSVLQCLTY
TEPFAAYLQSGKHKSSCRTAGFCALCALQNHVKTALQSTGKIVTPSQIVKNLRCISRSFR
NSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYEKSLVHKIFGGRLRSQVKCTQCSHC
SNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKA
PYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFISDSKGADFKYSLYGVLVHAGWNTQ
SGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFYVRDRVGNPTPRKDNITANM
PARRTIPEKISGLSDMIQSGVIEAKLNGSSSPYGDKRLHGISNGNSIKTSREHYLKKDGK
TEAPKASENNGLASTQKASAPQIDGATLSAQSKQITSTGHREVSSSDRSASLTHVIVNQA
VAMVPSQELQPKVDGLTDTSSLGNGNAILSERNKQTSQHQNPFSMPASHGKDTGAGLAAQ
TFPTKDAIVSNGVVPSSRDPISSEKVCGLQKSIKQDDKTVKELPISENNIVSGLERVNAR
KQTSSEVSMKVAAADSCNSNTPKRVDLKSKKLVRYPVMNMWLGPRQVMLGSLKVQKKKKC
NRTRRRSVVCEDMANATCSGNNTSEQQASTSTTTSSETVQCTPRGRKRAYDSDSPKNNNQ
KQNKQDVIGADTGSGELNMDKRNVISETAASAELPKLGPGSSANQEHSRNNVHAKLGVPR
HFTVLTRDLAEVTVPCWDDVAVSNAEARESKHSESKSIGYVLDEWDEEYDRGKTKKIRNS
KEDYGGPNPFQEEANYISQRNMKQRTYQPKSWKKHAHVRR |
|---|
| NT seq |
2823 nt  +upstreamnt +downstreamnt
atggcggaggttgaggtggcggcggcggcggcggcggcggagggggtgctgcacaggagg
atcgagttccacctcgcgaggaggtcgcactcggtggtggcggtcgggggaggcgggttc
cggatggagacgctgaaccccgacgcgggtgacagagcggcggcgggggcggcgcagggg
gtgggggtggcggcggggggcgagggggaggcgaggagggcggagaagggggaggtggtc
ggcggtgggctggatccggagctcagcgtcgccaggatctacctcgggagaattggtgct
ggcctgcaaaatcttgggaacacttgctacctgaactcggtgctgcaatgcttgacgtac
acagaaccatttgcggcctatttgcagagcgggaagcacaagtcttcatgtcgtactgct
ggattttgtgcactatgtgctcttcaaaaccatgttaagactgctctacagtcaactgga
aaaatagtgacgccatcacagattgtcaagaacttgcgctgcatctcccgtagtttccgc
aattcaaggcaggaggatgcacatgagttaatggttaatttacttgaatccatgcataaa
tgttgtctaccttctggagtaccaagtgagtctcctagtgcatatgagaagagcttagtt
cacaaaatatttggtggccgcctaagaagtcaggtgaaatgcacacagtgctcacattgc
tccaacaaatttgatcctttcttggatctcagccttgatattggtaaggccacgtctctg
gtgagggcacttcaaaatttcactgcggaagagctcttagatgggggagaaaagcaatat
cagtgccaacgctgcaggaaaaaggttgtagcaaagaaaaagtttacaattgataaggcg
ccatatgttctgacaattcatctgaagcgctttagccctttcaacccccgtgaaaagatt
gacaaaaaagttgattttcagccaatgctagacttgaagccatttattagcgactctaaa
ggcgcagattttaaatacagcctttatggtgttttggttcatgctggttggaacactcag
tcaggccattattattgcttcgttcgaacttccagtggaatgtggcacaaccttgatgat
aaccaggtacgccaagtccgtgaggcagatgtattgagacagaaagcatatatgttattt
tatgtacgtgacagagttgggaatccgactccacgcaaggataatatcactgctaatatg
ccagccaggagaacaatacctgaaaagatctcaggtctgagtgatatgatccagagcggc
gtaattgaagcaaaattgaacggttcctcgtctccttatggcgataagaggttgcacggc
ataagcaatgggaactcaatcaagacttcaagagagcattatttgaagaaagatggcaaa
actgaagctcctaaagcctctgaaaacaatggcctggcttccacacagaaagcttctgca
cctcaaattgatggtgctaccttatctgctcaatctaagcaaattacttcaactggtcac
agagaggtatcttcatcagatcgatctgcatctcttacacatgtgattgtgaaccaagca
gtggccatggttccgtcgcaggaattgcaaccaaaggttgatggcttaaccgatacctct
tccctgggcaatggcaatgcgatattgtctgagcgaaataaacaaacatcccagcatcaa
aatccattttctatgccagcttcccatggaaaggacacaggggcagggcttgctgcacaa
actttcccaactaaggatgctattgtttcaaatggtgttgtacctagtagcagggatcca
atttccagtgagaaggtgtgtggcttgcaaaaatccatcaagcaagatgacaaaacggtg
aaagaacttcctataagtgagaacaatatagtatcaggacttgaacgagtcaacgccaga
aaacagactagctctgaagtttccatgaaggtagctgcagctgattcgtgcaatagcaac
acacctaaaagggtggatttgaagtcaaagaaacttgtgagatatccagtcatgaacatg
tggcttgggcccagacaagttatgctaggttcactaaaggtacaaaagaaaaagaaatgc
aatagaactagaagacggtctgtagtttgtgaggacatggccaatgccacttgttcaggt
aacaacacaagcgagcagcaggcatcaacatcaacaacaacgtcgtctgaaactgtgcaa
tgtactcccagagggcggaaacgtgcctatgatagtgacagtcctaaaaataataaccag
aagcaaaacaagcaagacgttattggagccgatactggtagtggtgaacttaacatggat
aagagaaatgttattagtgaaaccgctgctagtgctgagcttccgaagctgggtccaggc
tcttctgcaaatcaggaacattcaaggaacaatgttcatgcaaaattgggagttccccgg
cattttactgttctgacaagggacttggctgaagttactgttccatgctgggatgatgtt
gctgtgtcaaatgctgaggcaagagagtcaaaacattcagaaagcaagagcattggatat
gtgttagatgaatgggacgaggagtatgaccgtggaaagaccaagaaaatcagaaattca
aaggaagactacggtggaccaaaccccttccaggaggaggccaactacatctcacagaga
aacatgaaacagaggacctatcaacccaaatcctggaagaaacatgcccatgttagaaga
tga |
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