KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4340327Help
Entry
4340327           CDS       T01015                                 

Gene name
bip110
Definition
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23
  KO
K11855  
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
Enzymes [BR:osa01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     4340327 (bip110)
Peptidases [BR:osa01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   4340327 (bip110)
Ubiquitin system [BR:osa04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    4340327 (bip110)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
UniProt: 
Position
6
AA seq 940 aa AA seqDB search
MAEVEVAAAAAAAEGVLHRRIEFHLARRSHSVVAVGGGGFRMETLNPDAGDRAAAGAAQG
VGVAAGGEGEARRAEKGEVVGGGLDPELSVARIYLGRIGAGLQNLGNTCYLNSVLQCLTY
TEPFAAYLQSGKHKSSCRTAGFCALCALQNHVKTALQSTGKIVTPSQIVKNLRCISRSFR
NSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYEKSLVHKIFGGRLRSQVKCTQCSHC
SNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKA
PYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFISDSKGADFKYSLYGVLVHAGWNTQ
SGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFYVRDRVGNPTPRKDNITANM
PARRTIPEKISGLSDMIQSGVIEAKLNGSSSPYGDKRLHGISNGNSIKTSREHYLKKDGK
TEAPKASENNGLASTQKASAPQIDGATLSAQSKQITSTGHREVSSSDRSASLTHVIVNQA
VAMVPSQELQPKVDGLTDTSSLGNGNAILSERNKQTSQHQNPFSMPASHGKDTGAGLAAQ
TFPTKDAIVSNGVVPSSRDPISSEKVCGLQKSIKQDDKTVKELPISENNIVSGLERVNAR
KQTSSEVSMKVAAADSCNSNTPKRVDLKSKKLVRYPVMNMWLGPRQVMLGSLKVQKKKKC
NRTRRRSVVCEDMANATCSGNNTSEQQASTSTTTSSETVQCTPRGRKRAYDSDSPKNNNQ
KQNKQDVIGADTGSGELNMDKRNVISETAASAELPKLGPGSSANQEHSRNNVHAKLGVPR
HFTVLTRDLAEVTVPCWDDVAVSNAEARESKHSESKSIGYVLDEWDEEYDRGKTKKIRNS
KEDYGGPNPFQEEANYISQRNMKQRTYQPKSWKKHAHVRR
NT seq 2823 nt NT seq  +upstreamnt  +downstreamnt
atggcggaggttgaggtggcggcggcggcggcggcggcggagggggtgctgcacaggagg
atcgagttccacctcgcgaggaggtcgcactcggtggtggcggtcgggggaggcgggttc
cggatggagacgctgaaccccgacgcgggtgacagagcggcggcgggggcggcgcagggg
gtgggggtggcggcggggggcgagggggaggcgaggagggcggagaagggggaggtggtc
ggcggtgggctggatccggagctcagcgtcgccaggatctacctcgggagaattggtgct
ggcctgcaaaatcttgggaacacttgctacctgaactcggtgctgcaatgcttgacgtac
acagaaccatttgcggcctatttgcagagcgggaagcacaagtcttcatgtcgtactgct
ggattttgtgcactatgtgctcttcaaaaccatgttaagactgctctacagtcaactgga
aaaatagtgacgccatcacagattgtcaagaacttgcgctgcatctcccgtagtttccgc
aattcaaggcaggaggatgcacatgagttaatggttaatttacttgaatccatgcataaa
tgttgtctaccttctggagtaccaagtgagtctcctagtgcatatgagaagagcttagtt
cacaaaatatttggtggccgcctaagaagtcaggtgaaatgcacacagtgctcacattgc
tccaacaaatttgatcctttcttggatctcagccttgatattggtaaggccacgtctctg
gtgagggcacttcaaaatttcactgcggaagagctcttagatgggggagaaaagcaatat
cagtgccaacgctgcaggaaaaaggttgtagcaaagaaaaagtttacaattgataaggcg
ccatatgttctgacaattcatctgaagcgctttagccctttcaacccccgtgaaaagatt
gacaaaaaagttgattttcagccaatgctagacttgaagccatttattagcgactctaaa
ggcgcagattttaaatacagcctttatggtgttttggttcatgctggttggaacactcag
tcaggccattattattgcttcgttcgaacttccagtggaatgtggcacaaccttgatgat
aaccaggtacgccaagtccgtgaggcagatgtattgagacagaaagcatatatgttattt
tatgtacgtgacagagttgggaatccgactccacgcaaggataatatcactgctaatatg
ccagccaggagaacaatacctgaaaagatctcaggtctgagtgatatgatccagagcggc
gtaattgaagcaaaattgaacggttcctcgtctccttatggcgataagaggttgcacggc
ataagcaatgggaactcaatcaagacttcaagagagcattatttgaagaaagatggcaaa
actgaagctcctaaagcctctgaaaacaatggcctggcttccacacagaaagcttctgca
cctcaaattgatggtgctaccttatctgctcaatctaagcaaattacttcaactggtcac
agagaggtatcttcatcagatcgatctgcatctcttacacatgtgattgtgaaccaagca
gtggccatggttccgtcgcaggaattgcaaccaaaggttgatggcttaaccgatacctct
tccctgggcaatggcaatgcgatattgtctgagcgaaataaacaaacatcccagcatcaa
aatccattttctatgccagcttcccatggaaaggacacaggggcagggcttgctgcacaa
actttcccaactaaggatgctattgtttcaaatggtgttgtacctagtagcagggatcca
atttccagtgagaaggtgtgtggcttgcaaaaatccatcaagcaagatgacaaaacggtg
aaagaacttcctataagtgagaacaatatagtatcaggacttgaacgagtcaacgccaga
aaacagactagctctgaagtttccatgaaggtagctgcagctgattcgtgcaatagcaac
acacctaaaagggtggatttgaagtcaaagaaacttgtgagatatccagtcatgaacatg
tggcttgggcccagacaagttatgctaggttcactaaaggtacaaaagaaaaagaaatgc
aatagaactagaagacggtctgtagtttgtgaggacatggccaatgccacttgttcaggt
aacaacacaagcgagcagcaggcatcaacatcaacaacaacgtcgtctgaaactgtgcaa
tgtactcccagagggcggaaacgtgcctatgatagtgacagtcctaaaaataataaccag
aagcaaaacaagcaagacgttattggagccgatactggtagtggtgaacttaacatggat
aagagaaatgttattagtgaaaccgctgctagtgctgagcttccgaagctgggtccaggc
tcttctgcaaatcaggaacattcaaggaacaatgttcatgcaaaattgggagttccccgg
cattttactgttctgacaagggacttggctgaagttactgttccatgctgggatgatgtt
gctgtgtcaaatgctgaggcaagagagtcaaaacattcagaaagcaagagcattggatat
gtgttagatgaatgggacgaggagtatgaccgtggaaagaccaagaaaatcagaaattca
aaggaagactacggtggaccaaaccccttccaggaggaggccaactacatctcacagaga
aacatgaaacagaggacctatcaacccaaatcctggaagaaacatgcccatgttagaaga
tga

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