KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4345225Help
Entry
4345225           CDS       T01015                                 

Definition
Os08g0304900
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:osa00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    4345225
Enzymes [BR:osa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     4345225
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     4345225
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
8
AA seq 409 aa AA seqDB search
MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK
NLWLALDSPPFPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPLKYSKLLVVMDDGLEF
SFTDKRRFAKIRFLDNPEAVPPISELGPDALFEPLHLDDFVESLSRKKAPIKALLLDQSF
ISGIGNWIADEVLYQARIHPMQTASMISKEKCKALHQCIIEVIEKSLEVGCNSSQYPENW
IFHSREKKPGKKIDFITVGGRTSAYVPELQKLDGIDATASRAKISKEQSKSNKAAREVDD
DEEEAKPAKRGRKQLVKATHEIQEDEEDTKESKRGRKQPAKTSKGSWKKAHHSSEGSGDD
DSDDEAVDKVVAEQGKRRDPKQPAEAKSSSDKGGSAAPAKRPQRKKRQL
NT seq 1230 nt NT seq  +upstreamnt  +downstreamnt
atgccggagctgccggaggtggaggtggcgcgacgggcgctggaggagcactgcgtcggg
aagaggatcgtgcggtgctcggctgcagatgacaccaaggtcatcgacggcgtcgccccg
ccgcggctggaggcagcgcttgtcgggaggaccatctccgctgctcgccgcaagggcaag
aatctgtggcttgcgcttgattctccgcccttcccttccttccagttcggaatggctgga
gctatttacatcaagggtgtggaactgagcaaatacaaaaggtctgcagtgagcccgact
gaggaatggcctttgaagtattccaagctgcttgttgtaatggatgatggtttggagttt
tccttcactgataagaggcgttttgcaaaaattcgctttcttgacaatccagaagctgtc
ccaccaatttctgagcttggaccagatgccttatttgaacctcttcatcttgatgatttt
gtagagtcactaagtaggaaaaaagctccaataaaagcccttttgcttgatcagagcttt
atatcaggaattggcaattggattgcagatgaagtgctttatcaggcaaggattcatcca
atgcaaacagcatcgatgatttctaaggagaaatgcaaggcactccatcagtgcattata
gaggtgattgaaaagtccttagaagttggttgcaacagcagtcagtatccagaaaactgg
atatttcactccagggagaagaaacccgggaagaaaattgacttcattacagttggtggc
aggacttcagcatatgtgccagagttgcagaagctggacgggattgatgcaacagcaagc
agagcgaaaataagcaaagaacagagcaaatcaaataaagctgctcgtgaagtggacgat
gatgaggaagaggctaaacctgccaagaggggaaggaagcaattagtgaaggcaacccat
gagatccaagaggatgaggaagatacaaaagaatcaaagagaggaaggaagcaaccagca
aagacatcgaagggctcgtggaagaaagctcatcattcttctgagggtagtggtgacgac
gacagtgatgatgaagcagttgataaggtggtcgcggaacaagggaagaggagggatcca
aagcaaccagcagaggcgaaaagctcgtcagacaaaggaggaagtgctgccccagcaaag
aggccacagaggaagaagcggcaattatag

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