KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4346063
Entry
4346063           CDS       T01015                                 
Name
(RefSeq) oligouridylate-binding protein 1B
  KO
K13201  nucleolysin TIA-1/TIAR
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4346063
   03041 Spliceosome [BR:osa03041]
    4346063
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     4346063
Spliceosome [BR:osa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    4346063
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_5 xRRM
Other DBs
NCBI-GeneID: 4346063
NCBI-ProteinID: XP_015649757
UniProt: Q6YZW2
Position
8:complement(25859014..25864890)
AA seq 447 aa
MNGAGGNHQQQQQQQQRLRQQQQQQALLMQQALQQQQQYQSGVLAAAAAAAMTQMEPISN
GNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDR
RSAALAIMTLHGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA
YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAE
EKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHR
HFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWGNKPTPP
GTSSKPLPPPLPSYQPVPMAGVPQGFSAADIVAYQRQLTLSQVAAGQIAGQHGLAGQVSA
GLLAAGSQALYDGYPNQSSAQQLMYYN
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgaacggcgccggcgggaaccaccagcagcagcagcagcagcagcagcggctcaggcag
cagcagcagcagcaggccctcctgatgcagcaggcgctgcagcagcagcagcagtaccag
tccggcgtcctcgccgccgccgccgcggcggccatgacccagatggagcctatttcaaat
ggcaatcttccaccagggtttgatccatccacatgtcgcagtgtgtatgttgggaatgtg
caccctaatgttactgagagccttctaatcgaagttttccagagttctggccttgtggaa
agatgcaagctcatccggaaggagaagtcttcctttggttttgttgactattatgatcgg
aggtcagcggctcttgcaataatgacccttcatggtcgtcacatatgtggccaagcaatc
aaggtgaactgggcttatgcaagtacacagagggaggatacatctgggcatttccatatt
tttgttggtgatttaagttctgaagtgaatgatgcaactctttatgcctgtttctcagca
tatccttcttgttctgatgctcgagtcatgtgggataacaaaaccggacgctccagaggt
tatggttttgtctccttccgtaatcaacaggaagctgagactgctataactgaaatgact
gggaaatggcttggaagcagacaaataaggtgtaattgggcaacaaagaacaatgcagaa
gagaaacaagaaactgacaaccataatgcagttgtactaacaaatggtagttctagtaat
ccaggaatggaggcaagtcaggacaccggaagtaaagagaatccagagaacaaccctgat
tgtactacggtgtatgttggcaaccttggacatgaggttaaccgagatgagcttcaccgc
cacttctataatttaggtgttggggctattgaggaagttcgcgttcaacaggataaagga
tttgggtttgtgagatacagtaaccatggcgaagcagcattggctattcagatggccaat
ggattggtagtgcgtgggaagccgatcaagtgctcatggggcaacaaacctaccccacct
ggtacatcctccaagccattgccaccgccacttccttcatatcaacccgtaccaatggca
ggtgtgccacaaggtttctcggcagctgatatcgtagcatatcagaggcaacttacctta
agccaggtcgcagctgggcagattgctggccagcatggccttgcaggtcaggtatccgca
gggcttcttgctgctggctcccaggccctctacgacgggtacccgaaccagtcatcagcg
caacagcttatgtactacaactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (41)   

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