KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4348713
Entry
4348713           CDS       T01015                                 
Name
(RefSeq) SKP1-like protein 11
  KO
K03094  S-phase kinase-associated protein 1
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03083  Polycomb repressive complex
osa04120  Ubiquitin mediated proteolysis
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4348713
   04120 Ubiquitin mediated proteolysis
    4348713
  09126 Chromosome
   03083 Polycomb repressive complex
    4348713
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4348713
   04121 Ubiquitin system [BR:osa04121]
    4348713
   03036 Chromosome and associated proteins [BR:osa03036]
    4348713
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    4348713
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     4348713
   Cul7 complex
     4348713
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     4348713
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     4348713
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 4348713
NCBI-ProteinID: XP_015613361
UniProt: Q7XE44 A3C536
Position
10:15695601..15696693
AA seq 220 aa
MASTTAAAEDHKGKRPLPPEEADEAAAAPPPAAAEEEGEKLVLVSDDGVEVLASVAAARV
SKTLRGMIEDECATGAIPIAGVHSDVLALLVEYCERHAPHYDPEASDRDRYPFPPFPVEL
PPTASSIKPVTFVDPDADPHGLKAFDKKFLDVDNSTLFEIIMAANYLNIEELLDDACTAV
ADKMRGKKPEEIRDIFEIENDYTPEQEAEVRRENAWAFED
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcctccacaaccgccgccgccgaggaccacaagggcaagcgccccctgccgccggag
gaggcggacgaggcagcggctgcgccgccccccgccgccgcggaggaggagggcgagaag
ctggtgctggtgtcggacgacggcgtggaggtgctcgcgtcggtggcggcggcgcgggtg
tcgaagacgctccgcggcatgatcgaggacgagtgcgccacgggcgccatccccatcgcc
ggcgtccactccgacgtgctcgccctcctcgtcgagtactgcgagaggcacgcgccgcac
tacgacccggaggcctccgaccgcgaccgctacccgttcccgcccttccccgtcgagctc
ccccccaccgcctcctccatcaagcccgtcaccttcgtcgaccccgacgccgacccgcac
ggcctcaaggcgttcgacaagaagttcctcgacgtcgacaactccaccctcttcgagatc
atcatggctgccaactacctgaacatcgaggagctgctcgacgacgcgtgcaccgcggtg
gcggacaagatgagggggaagaagccggaggagatccgcgacatcttcgagatcgagaac
gactacacgccggagcaggaggcggaggtcaggagggagaacgcctgggccttcgaggac
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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