KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4348952
Entry
4348952           CDS       T01015                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4348952
   04121 Ubiquitin system [BR:osa04121]
    4348952
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     4348952
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    4348952
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    4348952
SSDB
Motif
Pfam: zf-RING_2 zinc_ribbon_9 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-rbx1 zf-RING_5 zf-RING_UBOX zf-ANAPC11 zf-C3HC4_3 zf-RING_16 Anti-TRAP
Other DBs
NCBI-GeneID: 4348952
NCBI-ProteinID: XP_015614713
UniProt: Q7XD81 A0A5S6RD87
Position
10:complement(18438786..18442494)
AA seq 370 aa
MSNPAAYYAAVARKQYFCYQCNRTVLLPASAAAAGALSCPECRGDFIEEVNVPAPAIIPF
PFAFPPMMPTATSASAAAAAAASPTQSSSSSAATSPSSDLSAFLNSMLGPLNLRTDERMP
GTTSAAGTATPEDEPDGFDAVTFFQNYLQNLMDGGANIQVLLDDASVGLAPGIGRVGGAS
FGDYFVGPGLEQLIEQLTENDPNRYGTPPAAKSALSTLPDVVVTDAMVAAADGAECAVCK
EDFSPGEGAKQMPCKHIYHADCIMPWLDLHNSCPICRFELPTDDPDYEGRKKSNPQPTAG
VDAGAASGSSTAAEEREESGESARLVERRFNVSLPWPFSGLGSQTPQQDGSNGGAGASGS
KDGGASSDKK
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgtcgaatccggccgcctactacgccgccgtcgcgcggaagcagtacttctgctaccaa
tgcaaccgcaccgtcctcctcccggcctccgccgccgccgccggggcgctctcctgcccg
gagtgccgcggggatttcatcgaggaggtcaacgtccccgcccccgccatcatccccttc
cccttcgccttccccccgatgatgcccaccgccacctccgcctccgccgccgccgccgcc
gcggcctcgccgacccagtcctcctcctcgtccgccgccacgtcgccatccagcgacctc
tccgccttcctcaacagcatgctcggcccgctcaacctccgcaccgacgagcggatgccg
ggaaccacctccgccgcgggcacggcgacccccgaggacgagcccgacgggttcgacgcg
gtcacgttcttccagaactacctccagaatctcatggacggcggcgccaacatccaggtc
ctcctcgacgacgccagcgtcggcctcgcccccggcatcggccgcgtcggcggcgccagc
ttcggggactacttcgtcggcccgggcctggagcagctcatcgagcagctcaccgagaac
gacccgaaccgctacggcacgccgccggcggccaagtcggctctctccacgctccccgat
gtcgtcgtgaccgacgccatggtcgccgcggcggatggcgccgagtgcgccgtctgcaag
gaggatttctcgcctggggaaggggccaagcagatgccctgcaagcacatttaccacgcc
gactgcatcatgccatggctggatctccacaattcatgccccatatgccgctttgagctg
cctactgatgaccctgattacgaggggcgtaagaaatcaaacccacagccaactgctggc
gttgatgccggagctgcatctgggagttctactgctgctgaggagcgagaggagagtggg
gagagtgcgaggttggtcgaacggcggtttaacgtgtcgctgccatggccttttagtgga
ttgggatcgcaaacgccgcagcaggatgggagcaatgggggcgctggtgccagtggctcg
aaggatggaggcgcatccagtgacaaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (12)   
   RefSeq(nuc) (2)   
   GenBank (5)   
   EMBL (5)   
Protein domain (12)   
   Pfam (12)   
All databases (56)   

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