KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4348994
Entry
4348994           CDS       T01015                                 
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai
  KO
K15685  E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4348994
   04131 Membrane trafficking [BR:osa04131]
    4348994
   04121 Ubiquitin system [BR:osa04121]
    4348994
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     4348994
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    N6-methyltransferase complex
     4348994
Membrane trafficking [BR:osa04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    4348994
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    4348994
SSDB
Motif
Pfam: zf-C3HC4_3
Other DBs
NCBI-GeneID: 4348994
NCBI-ProteinID: XP_015613581
UniProt: Q7G2H1 Q8LNT6
Position
10:18794536..18798470
AA seq 502 aa
MLQIRLSKIGSSDSGAAASGAAAGAGGGVGGGGVGGAGAGAGGGPPKSASAAAGGAPESV
TVACPDHLVIADLAVAKSLGAVTTSAVAAARTIGRRSRRPLGERVHICCRCEFPIALYGR
LIPCEHAFCLACARSDSSCYLCDERIQKIQTVKMMEGIFICAAPMCLKSFLKRSEFDSHI
PEVHANLLHNTPEREERNEPDAPNISRASGGDQRQSQMPEMSTARAPPRTGVSPSSSSHV
QDRDDRSRYHHSRDQTPQRPPMLSRPPSFHGRHSYPPGDTPSENNPPQGFDRPYNWAHEN
APGATPVRQESEHGSQDKQQMMPNAPFMFPPMPHQPNFMMPMNMNQPLMSNTSFNYPLQQ
DGNPQFFSAPFQMQLPDVGLDQGSASGVQPTPPGPLSFPEGLQRPWGMGLMGNPFQSMPL
GQGMPEGAGEPQGGGGMVFLQGGFGVMPDGSMNSGIPGRDLSGQGDRGVLAQMPMPMQMQ
MSLPPPPPTQPPSAGQQTFSRT
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgctccagattcgcctcagcaagatcggctcgtcggactccggcgccgccgcgtccggc
gcggcggccggggccggcggcggggtcggaggcggcggcgtaggcggcgccggcgccggc
gccggcgggggcccgccgaagtcggcctcggcggccgcgggcggggccccggagtccgtt
acggtcgcgtgccccgaccacctggtgattgccgacctcgccgtggcaaagagcctcggc
gccgtcacgacctccgccgtcgcggccgcccgcaccatcggccgccgctcccgccgcccc
ctcggcgagcgcgtccacatctgctgccgctgcgagttccccatcgccctctacggccgc
ctcattccttgtgaacatgctttctgtttagcctgtgctagaagtgattccagctgctat
ctttgtgatgagcgcattcagaagattcaaactgtgaaaatgatggaagggatttttatc
tgtgctgcacctatgtgtctcaagtctttccttaagagatctgaatttgattctcatata
cctgaagttcatgccaacctcctgcacaatactccagagagggaagaacgtaatgagcca
gatgctcctaacatttcccgtgcttctgggggtgatcaaagacaatctcagatgcctgaa
atgtctactgcacgtgctcctcctcggactggtgtttcaccctcttcaagttctcatgtg
caagatcgtgatgaccgatctcgctaccaccattccagagaccagaccccacagaggccc
cctatgctatcaagaccaccatcattccatggtcgtcactcttatccaccaggggatact
ccaagtgagaacaacccgcctcaaggatttgatcggccctacaactgggctcatgaaaat
gcacctggggcgactccagtccgccaagaatcagagcatggtagtcaagacaaacagcaa
atgatgcctaatgcgcctttcatgtttcctccaatgcctcatcagccaaacttcatgatg
cccatgaatatgaatcagccattaatgtccaacacatcattcaattatcctctccaacaa
gatggaaatccacagttcttcagtgcccctttccagatgcaactaccagatgttggactg
gatcaaggctcagcctcgggggtccaacctacgccacctggtcctttaagcttccctgag
gggcttcagcgtccatggggcatgggattgatgggcaacccatttcagtcgatgccactt
ggacagggaatgcctgaaggtgcaggtgaacctcagggaggtggcggaatggttttcctg
caaggtggtttcggagtcatgcctgatggctcaatgaattcaggcataccaggtagggat
ctttctggccaaggtgaccggggtgttctagcgcagatgcccatgccgatgcaaatgcag
atgtcacttcccccacctccccctacacagcccccttcagctggacagcaaacttttagc
agaacttga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (53)   

Download RDF
DBGET integrated database retrieval system