KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4349546Help
Entry
4349546           CDS       T01015                                 

Definition
(RefSeq) clathrin heavy chain 1
  KO
K04646  
clathrin heavy chain
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
Endocytosis
Brite
KEGG Orthology (KO) [BR:osa00001]
 Cellular Processes
  Transport and catabolism
   04144 Endocytosis
    4349546
Membrane trafficking [BR:osa04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    4349546
Exosome [BR:osa04147]
 Exosomal proteins
  Proteins found in most exosomes
   4349546
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
UniProt: 
Position
11
AA seq 1708 aa AA seqDB search
MAAANAPIAMREALTLTSLGIAPQFVTFTHVTMESEKYICVRETSPQNSVVIVDMAMPAQ
PLRRPITADSALMNPNTRILALKAQIPGTTQDHLQIFNIEAKTKIKSHQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPAKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFASFKVVGNENPSTLICFASKTTNAGQITS
KLHVIELGAQPGKPGFSKKQADLFFPPDFQDDFPVAMQISQKYGLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAESSASGGFYAINRRGQVLHATVNDATIVPFVSSQLNNLEL
AVNLAKRANLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPETVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTYPNVADAILANGMFSHYDRPRVAQLCEKAGLYLRALQHYTELPDIKRVMVNTHAI
EPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIVVQAAKEYSEQLGVDACIKLFEQFK
SYEGLYFFLGAYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPFYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWDKVLQPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGEVAVEAQLFE
EAFAIFKKFNLNVQAVNVLLDNIRSIERAEEFAFRVEEDAVWSQVAKAQLREGLVSEAIE
SFIRADDATHFLDVIRAAEEANVYDDLVKYLLMVRQKAREPKVDGELIFAYAKIDRLSDI
EEFILMPNVANLQNVGDRLYDEELYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPDAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRLDHTRVVDIMRKAGQLHLVKPYMVAVQSNNVSAVNEALNELYVEEEDYERLRESVDM
HDNFDQIGLAQKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGD
RELSEDLLVYFIEQGKKECFASCLFICYDLIRADVALELAWMNNMVDFAFPYLLQFIREY
TSKVDELVKDRIESQNEVRAKEKEEKDLVAQQNMYAQLLPLALPAPPGMGGPPPPMGMPG
MPPMGGMGMPPMGPGPMPAYGMPPMGSY
NT seq 5127 nt NT seq  +upstreamnt  +downstreamnt
atggcggcggccaacgcccccatcgccatgcgcgaggccctcacgctcaccagcctgggg
atcgcgccccagttcgtcaccttcacccacgtcaccatggagtcggagaaatacatctgc
gtccgcgagacctccccgcagaacagcgtcgtcatcgtcgacatggccatgcccgcgcag
cccctccgcaggcccatcaccgccgactccgccctcatgaaccccaacacccgcatcctc
gccctcaaagctcaaatacctgggacaacacaggatcacctgcaaatcttcaacattgag
gctaaaacaaaaattaagtcccaccagatgcctgagcaggttgtgttttggaaatggatc
accccaaagttgttgggtttggtaacacaaacatcagtttatcactggtcaattgaggga
gattctgaaccggccaagatgttcgataggacggctaatttggccaacaatcaaattatc
aactatcgatgtgatccatctgagaagtggcttgtgcttattggaattgcacctggtgct
ccagagaggccacaactggtgaagggaaatatgcaacttttttctgtggatcagcaacgt
agtcaggcacttgaagcccatgcagcatcctttgcatcatttaaggtcgtgggcaacgag
aacccttcaactctcatctgctttgcctcaaagacaactaatgctgggcagatcacttct
aagttgcatgttattgaattgggtgcccagccagggaaaccagggttttccaagaagcaa
gctgatcttttcttccccccagattttcaggatgattttcctgtggccatgcagatctct
cagaagtatggccttatctatgtaattacgaagcttggccttttatttgtatatgacttg
gaaacagctgcagcggtctatagaaatagaattagtccagatcctatattcttgacagca
gagtcttctgcaagtggtggtttttatgccatcaataggagaggacaggttttacatgcc
acagttaatgatgcaaccattgtgccttttgtcagcagtcaattaaataaccttgaacta
gctgtaaatcttgccaaaagagctaatcttcctggggcagagaacttagttgtgcaaagg
tttcaagaattgtttgcacaaacaaaatacaaggaagcagctgagttggctgcagaatct
cctcaaggtcttctccgaactcctgagactgttgcaaaatttcagagtgttcctgttcaa
gctgggcaaacgcctccactcttgcagtactttggcacattgctaactcgggggaagctc
aatgcttacgagtctcttgagctatctcgacttgttgtcaatcagaacaaaaagaacctt
ttggaaaactggttggctgaagacaaattggagtgcagtgaagaacttggagatcttgtc
aagactgtggacaatgatcttgctctgaaaatatacataaaggctagggcaacccctaaa
gttgttgccgcttttgctgaaagaagggaatttgacaagatccttatatattcaaagcag
gttggatacacccctgactacctcttcctcctccagaccattttacgtacggatccacag
ggagctgtcaactttgcgctcatgatgtcacaaatggaggggggctgtccagttgattac
aatactataactgatctcttccttcagagaaacatgatacgtgaggcaacagctttcctg
ctggatgttttaaagccaaacttgccggagcatgcttttcttcaaaccaaggttttggag
atcaacttggtcacttacccaaatgttgctgatgccatccttgctaatggtatgttcagt
cattatgatcgccctcgtgttgctcagctttgtgaaaaggctggcttgtacttgcgagct
ctccagcattacacagaattaccagatatcaagcgtgtcatggtgaatacccatgccatt
gagccacaggcacttgttgagttctttggcactctttcaagagagtgggctttggagtgc
atgaaggaccttctgctggtcaatctaagagggaatcttcaaattgttgtacaggctgcc
aaagaatactctgagcagctaggggttgatgcttgcataaaactgtttgagcaattcaaa
tcttacgagggcctttactttttcttgggagcttatttgagttccagtgaggatccagat
attcatttcaaatacatagaagcagctgctaggactggacagatcaaagaagttgaacgt
gtaaccagggaatccaacttttatgatgcggagaagacaaagaactttttaatggaagcg
aaactgcctgatgcccgtccgctgattaatgtctgcgaccgctttggatttgttccagat
ttgacccactatctgtatacaaataatatgcttcggtatattgaaggctatgtacagaaa
gtgaaccctggaaatgctccattagttgttggacagctacttgatgatgagtgccctgaa
gatttcattaagggtttgattctgtctgtccgttctctccttcctgttgagccactagtt
gatgaatgcgagaagaggaaccgcctacggctgctgacacaatttttggagcacttagtg
agcgagggtagccaagatgtccatgtgcacaatgctcttggaaaaatcatcattgacagc
aacaataatcctgagcacttccttaccaccaatccattttatgactctcgcgtggtcggt
aaatactgtgaaaagcgggatcctacccttgctgttgttgcttacagacgtggacagtgt
gatgatgaacttattaatgtcaccaataaaaactcactgttcaagctgcaagctaggtat
gtggttgaaagaatggatggtgatctgtgggataaagttctacagcctgaaaatgaatat
agaaggcaactcattgaccaagtggtttctacggctttgcctgaaagcaagagccccgag
caagtgtctgctgctgttaaggctttcatgacagctgatcttccccatgaactgattgaa
cttcttgaaaagatcgtccttcagaattctgctttcagtggaaacttcaatctgcagaac
cttctcatcttgacagccatcaaggctgacccatccagggtcatggactatgtcaacagg
ctggacaactttgatgggcctgctgttggagaagtagcagttgaagcacagctgtttgag
gaggctttcgctatcttcaagaagttcaacttaaatgtgcaggctgtcaatgttctattg
gacaacatccgaagcatagaaagagctgaagagtttgcattccgtgttgaagaagatgct
gtttggagccaggttgccaaggcccagttgcgtgaaggtttggttagtgaagcaattgag
tccttcattcgtgcagatgatgcaacacatttcctcgacgtcatccgtgctgctgaggaa
gctaatgtatacgatgatctagttaagtacttgcttatggtaaggcagaaggcaagggaa
cccaaagttgatggagaactcatctttgcgtatgctaagattgatagactcagtgatatt
gaagagttcattctcatgccaaatgttgccaatcttcaaaatgttggtgatcgtctgtat
gatgaagaactttatgaagcagcaaagatcatctatgccttcatctcaaactgggctaag
ctggctgttacccttgttaagctgaagcagttccaaggtgctgtggatgctgctcgcaag
gctaacagtgctaaaacatggaaggaagtctgctttgcttgtgttgatgccgaggagttc
cggctagcacaaatatgtggtctcaatattattgtccaggttgatgatttggaggaagta
agtgaatactaccagaacagaggatgtttcaatgaacttatttccctcatggaaagtggt
ctaggactggagcgtgctcacatgggcatcttcacagaattaggagtcctctatgctaga
tatcgccctgagaagctcatggaacacatcaaacttttctccacacgtctcaacattcct
aagcttatccgtgcttgtgatgaacagcagcactggaaagagcttacttacctatacatc
cagtatgatgaatttgacaatgctgccaccactattatgaaccattctccggatgcatgg
gatcatatgcaatttaaggatgttgctgttaaagttgcaaatgttgagctatactacaag
gcagtgcacttctatctgcaagagcatcctgatctcatcaatgaccttctcaatgtactt
gcgcttcgtttggatcatacaagagtcgtggacataatgcgcaaggctggtcagttgcat
cttgtgaaaccatacatggttgcagttcagagcaacaatgtctctgctgtgaatgaagct
ttgaatgagctttatgttgaagaggaggactatgagagactccgtgaatcggttgatatg
catgacaactttgatcagataggtcttgcccaaaagcttgagaagcatgaattgcttgag
atgaggaggatcgctgcctacatttacaagaaggctggcagatggaagcaatctattgcc
ctgtcgaagaaagacaacatgtacaaggattgcatggagacatgctcacagtctggtgac
cgcgagctgtcagaagatttgcttgtctatttcattgaacagggaaagaaagaatgcttt
gcttcttgtctctttatttgttatgacttgatccgtgcggatgttgctcttgagcttgca
tggatgaacaacatggtggactttgcattcccctatctgttacagttcattcgggagtac
acaagcaaggttgatgagctagtgaaggacaggattgaatcacagaatgaagtaagggct
aaagagaaggaagaaaaagatcttgttgctcagcagaacatgtatgcccaattgcttcct
ctcgccttgcctgctccacctggtatgggcggtcctccaccgccaatggggatgccgggc
atgcctccgatgggcggaatggggatgcctccgatgggtcccggacctatgccagcatat
gggatgcctccaatgggaagctactga

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