KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 9269241
Entry
9269241           CDS       T01015                                 
Name
(RefSeq) exosome complex component RRP41-like isoform X1
  KO
K12587  exosome complex component MTR3
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    9269241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    9269241
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     9269241
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 9269241
NCBI-ProteinID: XP_015628499
Position
3:35494051..35497796
AA seq 266 aa
MSAAATAGTYSPASAAGEKRRERKEELRRHLAEDADWPRADGRSFHDCRPAFMQTGPTTA
ASGSAYAEFGKTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFATPIRGQFASLFQGT
DNKEYSAMLHKALEGAVMLHTFPKTTVDVFALVLESGGSDLPIIISCASLALADAGIMMY
DLVTSVSVSCFGKNIIIDPTSDEEAWQDGSLMVAYMPARKEITQLTLTGEWSDGKITNAV
ELCMDACSKLCDILRERLKDASSLAE
NT seq 801 nt   +upstreamnt  +downstreamnt
atgtcggcggctgccaccgctgggacctactctccggcttctgccgcgggggaaaagcgt
cgggagaggaaggaggagctgcggcgccacctcgccgaggacgccgactggccccgcgcc
gacggccgctccttccacgactgccgtcctgcatttatgcaaacaggaccaacaaccgct
gcatcaggatctgcttatgcagaatttgggaagacaaaggtcattgtgtcagtgtttgga
ccgagagaaagcaagaaagcaatgttgtacagtgatactggtagactcaattgcaatgtg
agctacacaacatttgccactcctatacgtgggcagtttgcatctttgttccagggaaca
gataacaaggagtactccgcaatgcttcataaagctctggaaggcgcagtgatgttgcac
acttttccaaagaccactgttgatgtttttgccttggttcttgagtctggtggcagtgat
cttcccatcattatttcttgtgctagtcttgcgttggctgatgctggaatcatgatgtat
gaccttgttacatcagtatctgtgtcctgttttgggaagaacataatcattgatccaacc
tctgacgaggaagcatggcaagacggcagccttatggtggcgtacatgccagcccgcaaa
gagatcacgcagctaactcttactggagagtggtctgatggcaaaatcacgaacgcggtg
gagctctgcatggatgcctgcagtaagctctgtgacatacttcgggagcgcttgaaagat
gcttccagcttggctgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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