KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 9270245
Entry
9270245           CDS       T01015                                 
Name
(RefSeq) autophagy-related protein 3 isoform X1
  KO
K08343  ubiquitin-like-conjugating enzyme ATG3
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:osa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    9270245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    9270245
   04121 Ubiquitin system [BR:osa04121]
    9270245
   03029 Mitochondrial biogenesis [BR:osa03029]
    9270245
Membrane trafficking [BR:osa04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    9270245
Ubiquitin system [BR:osa04121]
 Ubiquitin-conjugating enzymes (E2)
  UBL-conjugating enzymes
   9270245
Mitochondrial biogenesis [BR:osa03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    9270245
SSDB
Motif
Pfam: Autophagy_act_C
Other DBs
NCBI-GeneID: 9270245
NCBI-ProteinID: XP_015613094
UniProt: B9G6Z8
Position
10:complement(22080045..22083322)
AA seq 260 aa
MQVKQKVYELYKGTVERVTGPRTVSAFLEKGVLSVPEFILAGDNLVSKCPTWSWEAGDPS
KRKPYLPPDKQFLVTRNVPCVRRAVSLEEEYDAAGAEVVLGDDEDGEGWLATHGVQASKP
EEEEDIPSMDTLDIGKTEGINSIPSYFSAGKKAEEEEDIPDMDTYEDTGNDSVATAQPSY
FVAEEPEDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMPLKPELVFEDISKTMRGR
RYFHSFQYLLLTCKMKHEST
NT seq 783 nt   +upstreamnt  +downstreamnt
atgcaggtgaagcagaaggtgtacgagctctacaaggggacggtggagcgggtcacgggg
ccgcgcaccgtgtcggcgttcctcgagaagggcgtcctctccgtccccgagttcatcctc
gccggcgacaacctcgtctccaagtgccccacctggtcctgggaggcgggcgatccgagc
aagaggaagccgtatctccctcccgacaagcaattcctcgtcaccaggaacgtgccttgc
gtaagacgcgctgtctcacttgaagaagagtatgatgcagcaggagctgaggtagttctc
ggtgatgatgaggacggtgaaggctggcttgccacacatggagtgcaagcatcaaagcca
gaagaggaggaagacataccatcgatggatacattggatatagggaaaactgaagggata
aactctattccctcatacttcagtgctggtaagaaggctgaagaagaggaggatatacca
gacatggacacttatgaagacacagggaatgattcagtggctaccgctcaaccttcatat
tttgtcgcagaagagcctgaagatgacaacatccttcgtactaggacatatgacgttagc
atcacatatgataaatattaccaaaccccacgtgtctggcttaccggatatgatgagtca
agaatgccattaaagcctgaacttgtgtttgaagatatcagcaagaccatgcgcggaaga
cggtattttcattcatttcagtatttgctattgacatgtaaaatgaaacatgaatcaact
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (35)   

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