KEGG   Odoribacter splanchnicus: Odosp_1043
Entry
Odosp_1043        CDS       T01428                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
osp  Odoribacter splanchnicus
Pathway
osp03030  DNA replication
osp03430  Mismatch repair
osp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:osp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Odosp_1043
   03430 Mismatch repair
    Odosp_1043
   03440 Homologous recombination
    Odosp_1043
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:osp03032]
    Odosp_1043
   03400 DNA repair and recombination proteins [BR:osp03400]
    Odosp_1043
Enzymes [BR:osp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Odosp_1043
DNA replication proteins [BR:osp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Odosp_1043
DNA repair and recombination proteins [BR:osp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Odosp_1043
SSDB
Motif
Pfam: RNase_T RNase_H_2 ExoX-like_C Rv2179c-like DUF2039
Other DBs
NCBI-ProteinID: ADY32110
UniProt: F9ZA84
Position
complement(1245041..1245823)
AA seq 260 aa
MKLNLANPIVFFDLETTGINIAKDRIVEISVLKVYPNGKEEQKTIRVNPGMHIPEEASAI
HGIYDEDVKDAPMFKHIARELAHYIEGCDLGGYNSNRFDIPLLAEEFLRAEVDFDMSKRK
FVDVQTIFHKMEQRTLSAAYHFYCDKCLEDAHTAAADTMATYEVLMAQLDRYGEKLENNI
DFLSKFSTQNKNVDFAGFIIYDDKGVEVFNFGKNKGVPVEKVLKEQQGYYDWMIKSDFPL
YTKKVLTKIKLRSSGLVKGV
NT seq 783 nt   +upstreamnt  +downstreamnt
atgaaactgaatttagctaatcccatcgtttttttcgatctggaaaccacgggaatcaat
attgctaaagaccggatcgtggaaatttcggtattgaaagtgtatccgaacggtaaggag
gaacaaaagaccatccgggtgaatccgggaatgcatatccccgaagaagcgtctgctatt
catggcatttacgatgaagatgtgaaagatgcaccgatgttcaagcatattgcccgcgaa
ttggcgcattatatcgaaggatgtgatttgggaggatataattcgaatcgtttcgatatc
cccttattggcagaagaatttttgcgtgcggaggtggatttcgatatgagtaaacggaag
tttgtagatgtacaaactattttccacaaaatggaacagcgtaccctgtcggctgcctac
catttttattgtgataaatgtcttgaagatgcccatacggctgcagccgacacgatggct
acctatgaggtgctgatggcccagctggatagatatggggaaaagctggaaaataatatc
gatttcttaagtaagttttctacccaaaacaagaacgtcgactttgccggttttattatt
tatgacgataaaggggtagaagtgtttaacttcggtaagaataaaggagtgcctgtagag
aaggtgttgaaagaacaacagggatattatgattggatgatcaaaagtgatttcccactt
tataccaaaaaggtgttgactaagattaaactgagaagttccgggttagtaaaaggggtg
tag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (40)   

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